Detailed information on CNT30509597


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30547627Solanum lycopersicumIpomoea triloba20.765.939060forward
CNT30382472Solanum lycopersicumManihot esculenta24.9123.6187.572reverse complement
CNT3045640Solanum lycopersicumPrunus dulcis21.1119.8191.861reverse complement
CNT30235645Solanum lycopersicumBrassica oleracea21.4520.288.7162reverse complement
CNT30714740Solanum lycopersicumMalus domestica golden21.1119.8191.861reverse complement
CNT30644641Solanum lycopersicumCannabis sativa21.816.9493.6563reverse complement
CNT3024632Solanum lycopersicumPopulus trichocarpa35.2933.6686.27102reverse complement

Expression of CNT30509597

Peptides detected in this lncRNA

>peptide 1 (74 aa)
MTLARYPSTAQSGSYSLLCETSLTHPPHFRSPAAQAFAWPTRPNSLLGQGRPENCHTSPTFWACSTFHHTDALT*

Sequence

>CNT30509597
GGTAGTTTAATTAGAACAGCCCATCAGACATTCGTTGAACTTATATGACACTGGCTCGTTATCCTTCCACTGCACAGAGCGGGAGCTATTCGTTGCTCTG
TGAAACCAGCCTCACGCATCCACCCCACTTTAGGAGCCCAGCAGCCCAAGCCTTCGCTTGGCCCACAAGACCCAACTCTTTGCTTGGACAGGGCAGGCCA
GAGAATTGTCACACAAGCCCTACCTTCTGGGCATGTTCAACATTCCACCACACTGATGCCCTCACTTGAGTTACAAGCCCACGCTACTG