CANTATAdb - search

Detailed information on CNT3050944

BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH33|UBQ11_ARATH, E-value = 7e-102

BLAST vs NONCODE:
NONPPAT000061, E-value = 3e-52

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT3019442	Cucumis sativus	Citrullus lanatus	68.08	77.48	89.04	657	forward
CNT30710399	Cucumis sativus	Glycine max	45.7	59.12	87.76	441	forward
CNT30620158	Cucumis sativus	Cajanus cajan	47.98	65.77	84.45	463	forward
CNT30174736	Cucumis sativus	Vigna angularis	48.39	40.64	86.72	467	forward

Expression of CNT3050944

Peptides detected in this lncRNA

>peptide 1 (51 aa)
KIYNAMFISFRKISTHSHKEKHKHFGKSILFNSNNRPPTGQLFPSTKSSTH*

>peptide 2 (40 aa)
MVSELSTSRVMVFPVNVLTKICIPPRRRNTRWRVDSFWML*

>peptide 3 (31 aa)
MKKKEGKRKKKERGGRTLEERNEYDRYREELE

Sequence

>CNT3050944
CGAAGATATACAATGCGATGTTCATTTCATTTAGAAAAATAAGTACACATTCACATAAAGAAAAACACAAACATTTCGGGAAATCAATTTTATTCAACAG
CAATAATAGGCCGCCTACAGGCCAGCTGTTTCCAAGTACCAAATCTTCAACACATTAACATTCAGAAATCATTCAAAGACAATCACCAACACCCAACAAC
ATCCACCACCATCTAAAAACCACCACGGAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGCAAGGGTACGACCGTCCTCTAGT
TGCTTACCGGCAAAGATAAGTCTTTGTTGGTCTGGGGGAATTCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCAATGGTGTCAGAGCTCTCAACCT
CTAGGGTGATGGTCTTTCCGGTCAACGTCTTGACAAAAATCTGCATACCACCACGAAGACGCAACACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTA
GTCGGCCAAGGTACGGCCATCCTCGAGTTGTTTTCCAGCGAAGATGAGACGTTGCTGATCCGGGGGAATTCCTTCCTTGTCCTGGATCTTGGCCTTGACG
TTGTCGATCGTATCAGACGACTCAACCTCAAGGGTGATTGTCTTACCGGTTAGGGTTTTAACGAAGATTTGCATCTGCCAGATAAGAAAAAGAAAATAAA
CAAACAAATAAGAACCCCTTTCTCCAAAATCACAACAACCTGTAAATCACGCGATGATAAGAAATAAAACCTAAATCGAAACCCTAAAACATCTCAATTC
AACAAATATCACAATACCATATAACACAAAAATAAACGAATCAAATTAGATGAACAAAAACCCAAAGAAATGAAAAAGAAAGAAGGCAAAAGAAAGAAAA
AAGAAAGAGGAGGCCGAACCTTGGAAGAAAGAAACGAATATGACAGATACAGAGAAGAATTAGAG