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Detailed information on CNT30509004


BLAST search results

BLAST vs Swiss-Prot:
sp|P93286|CCMFC_ARATH, E-value = 2e-21

BLAST vs NONCODE:
NONSTUT001379, E-value = 3e-68

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3098138Solanum lycopersicumSolanum tuberosum18.0420.5787.78180forward
CNT30622952Solanum lycopersicumDaucus carota7.8233.3387.1878reverse complement

Expression of CNT30509004

Peptides detected in this lncRNA

>peptide 1 (59 aa)
YFEFSYISGKNPLFLIMLYYQNILNYITSWHIRTDLLSFWIIYIYIYILFLWLYAFSYI*

>peptide 2 (51 aa)
MHIQFTSLPSLARLSPPSHNLAFHIYRYICIIYNYLIDIHIQFTFLPLFALS

>peptide 3 (60 aa)
MYNIQLSNRYAYTIHLFALSCSPLSSLSQSRFPYIQIYMYNIQLSNRYTYTIHLSPTFCPL

Sequence

>CNT30509004
GCTACTTTGAGTTCTCATATATTTCTGGTAAGAATCCACTATTCCTTATAATGCTTTATTACCAAAACATTCTCAATTATATTACTTCATGGCATATTCG
AACTGATTTACTTTCATTTTGGATCATATATATATATATATATATTCTATTTTTATGGCTTTACGCCTTTTCATATATTTGAGGGGCCAAAATCCTCTTT
AAATTCTTACATTTTTGAGTTTGCAGATTCAAAAATTCTAACTGATCAGCTGGACTAACATTTTACTGACACTAAGAGCACTTTTTCGTAAATAGATTGT
ATGTATAGCCACTTCAGTTGTGCTAGTCCTTTCTTGTAAGTATCTTTTTTCTGGAAATATGATTAACCAGAAAATATTATGTTTACGATTCTTCATCCAT
CGATGAATAAAATGCTCCATTTTTTCATTCTTACATGAGGCCGGAAAGTGAATTGGAAACAGGGAAGTATGCTAACACTATCACTTAACCCCTTTCAAAC
GAAAGACTGAATTGGACTGTTGAAGTCTATACACGTTAAGATTGAACTTGGGTCCGATTGGAAAGCTCTAATATTGGGCTTCCAAAACCCAAACCGAATT
GAGTTGGTTTTGAAACCAAATATTACTTTATAAAGGTAAGGGAATATAACGTGGTTAAGCAAACTTATACTATTTAATTACTCATTATAGCTATACTTTG
CTATAATTATCATTCACGGCTAACATTATAAATTAATTATGTGGGCTGACTTCGAGTTTGTATAGTTAAACACATTTTGTATAAGTATAATTCGCCATAA
TATATAAATACACATGTATAATATACAATTATCTAATCGATATGCATATACAATTCACCTCTTTGCCCTCTCTTGCTCGCCTCTCTCCTCCCTCTCACAA
TCTCGCTTTCCATATATACAGATATATATGTATAATATACAATTATCTAATCGATATACATATACAATTCACCTTTCTCCCACTTTTTGCCCTCTCTT