Detailed information on CNT30508953


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONSLYT000794, E-value = 5e-94

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30267777Solanum lycopersicumChenopodium quinoa96.656.0581.5227forward
CNT30642027Solanum lycopersicumCannabis sativa99.1536.5279.83233forward

Expression of CNT30508953

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MLDYNWVMWVSMKDWLENMLDLSGCSQGSWGYKWGKWGCNQEMW

Sequence

>CNT30508953
TGGGGCTGTAAGAAGGTGAAGTGGGGCTGTAAGATGGCGAAGTGGGGCTGTAAGATGGAGAAGTGGGGCTGTAGCTAGGCGAGGTTGGGCTATAGCTTGG
AGATGTTGGACTATAACTGGGTGATGTGGGTGAGTATGAAGGACTGGTTGGAGAATATGCTGGACTTGTCGGGCTGTAGCCAGGGGAGCTGGGGCTATAA
GTGGGGGAAGTGGGGCTGTAACCAGGAGATGTGGG