Detailed information on CNT30508755


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30317080Solanum lycopersicumCorylus avellana28.220.118475forward
CNT30501576Solanum lycopersicumCoffea canephora26.3230.5787.1470forward
CNT3091744Solanum lycopersicumSolanum tuberosum98.8725.6394.3263forward
CNT3038940Solanum lycopersicumCucumis melo22.5612.249060forward

Expression of CNT30508755

Peptides detected in this lncRNA

>peptide 1 (72 aa)
SVSNSKQGTHPFFKRYSISLSNCSSDKSGSKGGNVNVVVLLGNGKRSGGFESGEGCDHASLSNIATGSSGCR*

>peptide 2 (33 aa)
LSLEFQARNPSIFQKILNFAKQLLIGQVRKQGR*

Sequence

>CNT30508755
CTCAGTCTCGAATTCCAAGCAAGGAACCCATCCATTTTTCAAAAGATACTCAATTTCGCTAAGCAATTGCTCATCGGACAAGTCAGGAAGCAAGGGAGGT
AATGTCAACGTTGTTGTTCTTCTTGGTAACGGGAAAAGAAGCGGCGGATTTGAGTCCGGTGAAGGGTGCGACCATGCTAGCTTGAGCAACATTGCTACGG
GTAGCAGCGGCTGCCGATGAGACAATTGAGGAAGCCATTGCGTTTACTTACTTAGCTATAAAATGT