Detailed information on CNT3050869


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH33|UBQ11_ARATH, E-value = 4e-157

BLAST vs NONCODE:
NONTPRT002153, E-value = 2e-105

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30630785Cucumis sativusVigna unguiculata83.7172.9286.01622forward
CNT30157672Cucumis sativusPistacia vera83.1859.5484.95618forward
CNT30568726Cucumis sativusActinidia chinensis89.9195.0284.43668forward
CNT3087979Cucumis sativusVigna radiata83.8566.2184.75623forward
CNT30120554Cucumis sativusCitrus clementina83.1864.2484.14618forward
CNT3036185Cucumis sativusCucumis melo74.2953.7597.64552forward
CNT30726539Cucumis sativusLupinus angustifolius82.6464.5685.67614forward

Expression of CNT3050869

Peptides detected in this lncRNA

>peptide 1 (72 aa)
FNTLTFRNHSKTITNTQQHPPPSKNHHGDAGQGEGWTPSECCNQRESSHLQAASQRRSTSAGPEGCLPCPEF*

>peptide 2 (40 aa)
MVSELSTSRVMVFPVNVLTKICIPPRRRNTRWRVDSFWML*

Sequence

>CNT3050869
CTTCAACACATTAACATTCAGAAATCATTCAAAGACAATCACCAACACCCAACAACATCCACCACCATCTAAAAACCACCACGGAGACGCAGGACAAGGT
GAAGGGTGGACTCCTTCTGAATGTTGTAATCAGCGAGAGTCCTCCCATCTTCAAGCTGCTTCCCAGCGAAGATCAACCTCTGCTGGTCCGGAGGGATGCC
TTCCTTGTCCTGAATTTTAGCTTTCACATTATCGATCGTGTCGGAGCTCTCCACCTCCAAGGTGATGGTCTTTCCAGTCAGGGTCTTAACAAAAATTTGC
ATTCCACCCCTGAGACGAAGCACCAAATGCAAGGTTGACTCCTTCTGAATGTTGTAATCAGCCAGAGTCCTTCCATCTTCAAGCTGCTTCCCAGCGAAGA
TCAACCTCTGCTGGTCTGGTGGGATTCCCTCCTTGTCTTGGATCTTAGCCTTGACGTTATCAATGGTGTCAGAGCTCTCAACCTCTAGGGTGATGGTCTT
TCCGGTCAACGTCTTGACAAAAATCTGCATACCACCACGAAGACGCAACACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTACGG
CCATCCTCGAGTTGTTTTCCAGCGAAGATGAGACGTTGCTGATCCGGGGGAATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTATCAG
ACGACTCAACCTCAAGGGTGATTGTCTTACCGGTTAGGGTTTT