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Detailed information on CNT30508579


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30407222Solanum lycopersicumBeta vulgaris14.4228.588.5261forward

Expression of CNT30508579

Peptides detected in this lncRNA

>peptide 1 (54 aa)
FRDKSNKEEFLVLSRKKSFLFCVMNHFSSFRGKKLRLSKQLCHGSRIVCIAYRL*

Sequence

>CNT30508579
ATTTCGTGACAAATCAAATAAAGAGGAATTTCTAGTTTTATCTCGTAAAAAAAGCTTTCTATTTTGTGTAATGAACCATTTCTCTTCTTTTCGTGGAAAG
AAATTACGTTTAAGTAAGCAATTATGTCATGGTTCCAGGATTGTATGTATTGCGTATAGACTCTAGGTGCGTGGTTGCCTAACAATCGAGGTGAAGTCGG
GACCTAAACGATTGAATGGAACAATATATAGACAAGTAAATCCCTTATGGCTTCAAAGGTATTCCTTTAATTATTAAGAGTTAAGGGATTTATCATTCAA
AGGGAAGTAGACTACTCAAGAATTTTCTATTTTATTTGTTGGAATTGAATTTTAATAAAAAATTAATAGAACACGGAATCACTGAAATCTGTTTTCGTCT
TCACTGGTAACTTTAGTAAGGAG