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Detailed information on CNT30508053


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30730504Nicotiana attenuataCorchorus capsularis85.33100.1796.041187reverse complement
CNT30433918Nicotiana attenuataPapaver somniferum99.215295.071380reverse complement

Expression of CNT30508053

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MSTTGRGRHSVLRIFKGRRGRTGHHATCGALPAAGPYLRLSRFQGGQAVKQKR*

>peptide 2 (49 aa)
PTYTTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGQWESR*

>peptide 3 (54 aa)
MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRPRFCSDRRALLLIGA*

Sequence

>CNT30508053
CTCCCACTTATACTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCC
CTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTT
AAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCCTAAACATCC
GCAGGGACCATCGCAATGCTTTGTTTTAATTAAACAGTCGGATTCCCCTTGTCCGTACCAGTTCTGAGTTGGCTGTTCGACGCTCGGAGAAGGCCCCCGA
AGGAACCGTTCCCAGTCCGTCCCCCGGCCGGCACGCGGCGACCCGCTCTCGCCGCGGGAGCAGCTCGAGCAGTCCACCGACAGCCGACGGGTTCGGGACT
GGGACCCCCGTGCCCAGCCCTCAGAGCCAATCCTTTTCCCGAAGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATCGACCAGAGGCT
GTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGGACGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGGCGCACCGGACACCA
CGCGACGTGCGGTGCTCTTCCAGCCGCTGGACCCTACCTCCGACTGAGTCGTTTCCAGGGTGGGCAGGCTGTTAAACAGAAAAGATAACTCTTCCCGAGG
CCCCCGCCGACGTCTCCGGACTTCCTAACGTTGCCGTCAACCGCCACGTCCCGGTTCAGGAATTTTAACCCGATTCCCTTTCGGAGTACGCGCGAAACGC
GCTATCTGTCGGGGTTCCCCCGACCCTTAGGATCGACTAACCCATGTGCAAGTGCCGTTCACATGGAACCTTTCCCCTCTTCGGCCTTCAAAGTTCTCAT
TTGAATATTTGCTACTACCACCAAGATCTGCACCGACGGCCGCTCCGCCCAGGCTCACGCCCAAGGTTTTGCAGCGACCGCCGCGCCCTCCTACTCATCG
GGGCCTAGCACTTGCCCCGACGGCCGGGTGTAGGTCGCGCGCTTAAGCGCCATCCATTTTCGGGGCTAGTTGATTCGGCAGGTGAGTTGTTACACACTCC
TTAGCGGATTTTGACTTCCATGACCACCGTCCTGCTGTTTTAATCGTCCAACACCCTTTGTGGGATCTAGGTTAGCGCGTAGTTTGGCACCGTAACCCGG
CTTCCGGTTCATCCTGCATCGCCAGTTCTGCTTACCAAAAATGGCCCACTTGGTGCTCTTGATTCCATGGCGCGGCTCAACAAAGCAGCCG