Detailed information on CNT30508032


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3021669Nicotiana attenuataCitrullus lanatus90.8271.3196.761603forward
CNT30261808Nicotiana attenuataBrassica rapa90.7176.696.441601forward

Expression of CNT30508032

Peptides detected in this lncRNA

>peptide 1 (55 aa)
MHPFQKSGFVARISSRITTVIRVVDTIKQTITDLMSHSQFHSLNLFILTHAWLNL*

>peptide 2 (44 aa)
MLSQLFVFHKSKNFTSDYEIRMPPTVPVNHYSDPEGQRNRTEIL*

>peptide 3 (32 aa)
MKYECPRLSLLIITPIPKANVIGPKSYNVIPC*

>peptide 4 (44 aa)
MKFQRLPGPVGQGYKLVEYISVARVRPRTSKGITDLLLPQTSAA*

>peptide 5 (30 aa)
MMRRRHDGRAIYRVIMNHRSNGQSPHRPFI*

Sequence

>CNT30508032
GCTTACTAGGAATTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTACCCGGGCCTGTCGGCCAAGGCTATA
AACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGCGGCCTAAAAGGCCGT
AGTCCCTCTAAGAAGCTGGCCGCGAAGGGATACCTCCGCATAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATTAACCAGACAAATCGCTCCA
CCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTCTCAGTCTGTCAATCCTTACTATGTCTGGACCTGGTAAGTTTCCCCGTGTT
GAGTCAAATTAAGCCGCAGGCTCCACTCCTGGTAGTGCCCTTCCGTCAATTCCTTTAAGTTTCAGCCTTGCGACCATACTCCCCCCGGAACCCAAAAACT
TTGATTTCTCATAAGGTGCCGGCGGAGTCCTAAAAGCAACATCCGCCGATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCT
TCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAACATCCTTGGCAAATGCTTTCGCAGTTGTTCGTCTTTCATAAATCCAAGAATTTCACCTCTGACTA
TGAAATACGAATGCCCCCGACTGTCCCTGTTAATCATTACTCCGATCCCGAAGGCCAACGTAATAGGACCGAAATCCTATAATGTTATCCCATGCTAATG
TATACAGAGCGTAGGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAGCGCCGGAGGCACGACCCGGCCAATTAAGGCCAGGAGCGCATCGCCGGCA
GAAGGGACGAGACGACCGGTGCACACCTAGGGCGGACCGGCCGGCCCATCCCAAAGTCCAACTACGAGCTTTTTAACTGCAACAACTTAAATATACGCTA
TTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTTCCCTCCAATGGATCCTCGTTAAGGGATTTAAATTGTACTCATTCCAATTACCAGACTCATA
GAGCCCGGGATTGTTATTTATTGTCACTACCTCCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTACCTTCTTTGGATGTGGTACCCGGTTCTCAGGC
TCCCTCTCCGGAATCGAACCCTAATTCTTCGTCACCCATCAGCACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAT
GCGTCGCCGGCACGATGGTCGTGCGATCTATCGAGTTATCATGAATCATCGCAGCAACGGGCAGAGCCCGCATCGACCTTTTATCTAATAAATGCATCCC
TTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCTCTAGAATTACTACGGTTATCCGAGTTGTAGATACCATCAAACAAACTATAACTGATTTAATGAGCC
ATTCGCAGTTTCACAGTCTGAATTTGTTCATACTTACACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAGGATCAACCAGGTAGCATT
CCTCATTGACGCCGGCGTCGCATGAGCATGGCCGACCCAAAGGGCATGACCACGTCCAAGACGAGCACAACCGTCACTCGTAAGGAGCATTCTTTCGGCA
GATAGGAGCCAATGAAGACCCCATGCCCATTACGTTTGCCGAATCCGAGAGTTCGAGCATACTAG