Detailed information on CNT30507879


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30374695Nicotiana attenuataArabidopsis thaliana86.3340.8893.031276reverse complement
CNT30639035Nicotiana attenuataCapsicum annuum72.5386.5997.671072forward
CNT30115258Nicotiana attenuataEutrema salsugineum70.3798.3992.791040reverse complement

Expression of CNT30507879

Peptides detected in this lncRNA

>peptide 1 (93 aa)
YPLSLSISISGGKETYKDSPSNGERTGNSPALESGGSAVRIVVWRSVLSGGPGPSPLEGGAREGESPVVPGPCRTTRRCLRVGLFGNAAQIGR*

>peptide 2 (91 aa)
MRPGRMWNGVESGPPIDSGRGPAWIGGAAKARAFDTPVERRLLDCGRQRAPLACFGICALRTLACGLPIRPVLKHGPRSLTCVRVNERVNP*

>peptide 3 (40 aa)
MQPKSGGEFRPRLNTGERPIANKYREGKMKRTLKRESKSA*

>peptide 4 (40 aa)
MNRKPGYGAKLRANLDPTKGVGRLRQQDGGHGSRNPLRSV*

>peptide 5 (30 aa)
MCASQRASKPVRRKEADWWDPPEGCTADRP*

Sequence

>CNT30507879
ACTACCCGCTGAGTTTAAGCATATCAATAAGCGGAGGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAACAGCCCAGCCTTAGA
ATCGGGCGGCTCCGCCGTCCGAATTGTAGTCTGGAGAAGCGTCCTCAGCGGCGGACCGGGCCCAAGTCCCCTGGAAGGGGGCGCCAGAGAGGGTGAGAGC
CCCGTTGTGCCCGGACCCTGTCGCACCACGAGGCGCTGTCTACGAGTCGGGTTGTTTGGGAATGCAGCCCAAATCGGGCGGTGAATTCCGTCCAAGGCTA
AATACGGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGGAAAGATGAAAAGGACTTTGAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCGGGAGGGAA
GCGGATGGGGGCCGGCGATGCGCCCCGGTCGGATGTGGAACGGTGTTGAGTCCGGTCCGCCGATCGACTCGGGGCGTGGACCAGCGTGGATTGGGGGGGC
GGCCAAAGCCCGGGCCTTTGATACGCCCGTGGAACGCCGTCTCCTCGATTGTGGTAGGCAGCGCGCGCCTCTGGCGTGCTTCGGCATCTGCGCGCTCCGG
ACGCTGGCCTGTGGGCTCCCCATTCGACCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAACGAGCGAGTAAACCCGTAAGGCGTAA
GGAAGCTGATTGGTGGGATCCCCCTGAGGGGTGCACCGCCGACCGACCTTGATCTTCTGTGAAGGGTTCGAGGTGTGAGCATACCTGTCGGGACCCGAAA
GATGGTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGATACTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGG
GGCGAAAGACTAATCGAACCGTCTAGTAGCTGGTTCCCTCCGAAGTTTCCCTCAGGATAGCTGGAGCTCGCGTGCGAGTTCTATCGGGTAAAGCCAATGA
TTAGAGGCATCGGGGGCGCAACGCCCTCGACCTATTCTCAAACGTTTTAAATAGGTAGGACGGCGCGGCTGCTTTGTTGAGCCGCGCCACGGAATCAAGA
GCTCCAAGTGGGCCATTTTTGGTAAGCAGAACTGGCGATGCGGGATGAACCGGAAGCCGGGTTACGGTGCCAAACTGCGCGCTAACCTAGATCCCACAAA
GGGTGTTGGTCGATTAAGACAGCAGGACGGTGGTCATGGAAGTCGAAATCCGCTAAGGAGTGTGTAACAACTCACCTGCCGAATCAACTAGCCCCGAAAA
TGGATGGCGCTTAAGCGCGCGACCTACACCCGGCCGTCGGGGCAAGTGCTAGGCCCCGATGAGTAGGAGGGCGCGGCGGTCGCTGCAAAACCTTGGGCGT
GAGCCTGGGCGGAGCGGCCGTCGGTGCAGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAG