Detailed information on CNT3050777


BLAST search results

BLAST vs Swiss-Prot:
sp|P69325|UBIQP_SOYBN, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 1e-125

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30500348Cucumis sativusCoffea canephora85.1754.9583.8827forward
CNT30274489Cucumis sativusChenopodium quinoa87.0269.0484.62845forward
CNT30526024Cucumis sativusPhaseolus vulgaris87.3364.185.61848forward
CNT30165846Cucumis sativusPistacia vera87.1371.0384.63846forward
CNT3089455Cucumis sativusVigna radiata92.7974.183.46901forward
CNT30171101Cucumis sativusTrifolium pratense92.8954.2484.59902forward
CNT30311134Cucumis sativusCamelina sativa88.0562.7883.74855forward
CNT30623040Cucumis sativusDaucus carota92.3880.7484.62897forward
CNT30418079Cucumis sativusPapaver somniferum85.5864.2282.79831forward
CNT3026527Cucumis sativusPopulus trichocarpa88.2687.7284.95857forward

Expression of CNT3050777

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MVSELSTSRVMVFPVNVLTKICIPPRRRNTRWRVDSFWML*

>peptide 2 (72 aa)
FNTLTFRNHSKTITNTQQHPPPSKNHHGDAGQGEGWTPSECCNQRESSHLQAASQRRSTSAGPEGCLPCPEF*

>peptide 3 (40 aa)
MVSELSTSRVMVFPVNVLTKICIPPRRRNTRWRVDSFWML*

Sequence

>CNT3050777
CTTCAACACATTAACATTCAGAAATCATTCAAAGACAATCACCAACACCCAACAACATCCACCACCATCTAAAAACCACCACGGAGACGCAGGACAAGGT
GAAGGGTGGACTCCTTCTGAATGTTGTAATCAGCGAGAGTCCTCCCATCTTCAAGCTGCTTCCCAGCGAAGATCAACCTCTGCTGGTCCGGAGGGATGCC
TTCCTTGTCCTGAATTTTAGCTTTCACATTATCGATCGTGTCGGAGCTCTCCACCTCCAAGGTGATGGTCTTTCCAGTCAGGGTCTTAACAAAAATTTGC
ATTCCACCCCTGAGACGAAGCACCAAATGCAAGGTTGACTCCTTCTGAATGTTGTAATCAGCCAGAGTCCTTCCATCTTCAAGCTGCTTCCCAGCGAAGA
TCAACCTCTGCTGGTCTGGTGGGATTCCCTCCTTGTCTTGGATCTTAGCCTTGACGTTATCAATGGTGTCAGAGCTCTCAACCTCTAGGGTGATGGTCTT
TCCGGTCAACGTCTTGACAAAAATCTGCATACCACCACGAAGACGCAACACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGCAAGGGTACGA
CCGTCCTCTAGTTGCTTACCGGCAAAGATAAGTCTTTGTTGGTCTGGGGGAATTCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCAATGGTGTCAG
AGCTCTCAACCTCTAGGGTGATGGTCTTTCCGGTCAACGTCTTGACAAAAATCTGCATACCACCACGAAGACGCAACACAAGGTGGAGGGTGGACTCCTT
CTGGATGTTGTAGTCGGCCAAGGTACGGCCATCCTCGAGTTGTTTTCCAGCGAAGATGAGACGTTGCTGATCCGGGGGAATTCCTTCCTTGTCCTGGATC
TTGGCCTTGACGTTGTCGATCGTATCAGACGACTCAACCTCAAGGGTGATTGTCTTACCGGTTAGGGTTTT