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Detailed information on CNT30507458


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30629841Nicotiana attenuataVigna unguiculata12.4832.1481.38188forward
CNT30710011Nicotiana attenuataGlycine max12.4843.5280.85188forward
CNT3042792Nicotiana attenuataPrunus dulcis6.9128.1887.5104forward
CNT3094368Nicotiana attenuataSolanum tuberosum15.8792.2890.79239forward
CNT30154501Nicotiana attenuataPrunus persica9.344.8785.71140forward

Expression of CNT30507458

Peptides detected in this lncRNA

>peptide 1 (54 aa)
MDQPLQMGQQVGIHGPGPLLLLGEVGSLRSGRPVSWTSTKQSMGLRSLEFQDYQ*

>peptide 2 (47 aa)
EVKILNSTLPAYSVFLNGPAFTNGPTSRNPWARPTSTPRRSGFTAVR*

>peptide 3 (47 aa)
MHNLCIISISYNFLGVKKDIESKADMLAHWLDRVVCTFANSFAYKEA*

Sequence

>CNT30507458
ATGAAGTTAAAATTTTGAATTCGACTTTACCTGCATATTCAGTGTTTCTTAATGGACCAGCCTTTACAAATGGGCCAACAAGTAGGAATCCATGGGCCAG
GCCCACTTCTACTCCTCGGAGAAGTGGGTTCACTGCGGTCCGGTAGGCCGGTAAGTTGGACAAGTACCAAGCAATCAATGGGCTTGAGGTCACTGGAGTT
TCAAGACTACCAATGAAAGGGTCACCATTCAGGGGCTGAATCACTTGGTAAGTGGGCTACATAACCAAGAAAAAAAAAAGTAGAATTAATATATATACCC
GTTCACACAACAGTTTAAACTAAAAATAACCAGCGAATATAAATATGAAGAATTAACCCAAATAGCCGCTAGCTCGATCCTTAAACTAAAAATAGCTGGT
AGAGGTATACTATATGCATAATTTGTGTATTATATCTATATCATATAATTTTCTGGGTGTTAAGAAAGATATTGAATCGAAAGCGGACATGCTTGCTCAC
TGGCTAGATCGGGTTGTCTGTACCTTTGCTAACTCTTTTGCCTATAAGGAAGCTTGAAAGAGTGAATTCTCTGATCTATGACCCCGAAAGAAAGATAGTC
TTTTTTTCGATTCCGCGTGTGCATAATCAATATATAATCTATGTCTATGACGAGAAAAAGTAAACAATGTATATAGCCGGCTATATATGTAAAGAATGTA
TAATCGTGTATAATCTGTGTATAATCTAAACATACTAAGCTAAGAAAAGTAAACAGTTAATTTGACAGGCTGTTTGCGCAAAGATCCCAACCGGAGTAGC
AGACAAAATAAAGGACAGTTGGTGAGAATTGTTGACATCCAACAACCCAAGAGCACGCAGAGGTAATGGTCCATAGGAGTTTAATTGAATTCCTTGAAAA
TTATTAATTATATTGTGTATATAGATAATAAATTTCTTTAATAAAAATATATATAAATGGCAGAATAGCCTAGGAGACACTTGTACTTGTTCCGGTTTGT
CATCCCGGTCCCTACACTCCATAAAGTTTCATCTAGACACTTCAACTTAATCAAAACAATACTTTTAAACCCTTCGGAATCGCGTGAGGCTCACTTGCTT
GACGTGGATGACAAATCAGCATCCACATCAGATTCTATGCCAAAATAATATTATTTAACAAAATTTTAATTTCTTAAACAAAAAATAAAATAAAATAAGC
AAAAAATTAAAATTAAAGAAAGCCCTCCTCCCTTCTTCAAACCCATCCACTCAACCTTCTTAAAATAATAACCCACCTGCATGGCTTCTCCATCATGAGT
ACCACTATTTCCTTCACTCCTCTTTTAAAGAAAGTTAGCTATCCATGAAAAATACATGAGCAGAGAATTAAGTCTTTTGAATTTTGACTTATTCCTCTAC
CCCAATTTGAAAGGACTGTGAAAAAATTTGAAAGCTAAAACCATCGGAAAAAATGGAGGAAGGGACTGAAGAAGAAGAGGAGGGGGGGAGAGCGAAGGGG
GAAGGG