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Detailed information on CNT30507384


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30535409Nicotiana attenuataEucalyptus grandis22.6224.0492.7569reverse complement
CNT30515285Nicotiana attenuataJuglans regia29.1811.7687.6489forward
CNT30727389Nicotiana attenuataCorchorus capsularis23.2831.792.9671forward
CNT30652801Nicotiana attenuataRosa chinensis28.228.189.5386forward
CNT30128358Nicotiana attenuataCorymbia citriodora22.9525.369070reverse complement
CNT30154412Nicotiana attenuataPrunus persica29.1829.1887.6489forward

Expression of CNT30507384

Peptides detected in this lncRNA

>peptide 1 (30 aa)
PSLVTWACDPSGGNSVVGRWVISEGWALGG*

Sequence

>CNT30507384
GCCGAGCCTTGTAACGTGGGCTTGTGACCCAAGTGGGGGCAATAGTGTGGTGGGACGTTGGGTTATTTCTGAAGGCTGGGCTTTGGGTGGCTAATGTCCG
GCCTGCCCTATCCAAGCATGGAGTTGAGTCATGTGGCCCAAACGTAAGTATGGGTTGCTTGGCTCCTAGAGTGGGGCGGACTGCGTGAGGCTGGTTTCAC
AGAGCAACGAACAGCTCCCGCTCCGTGCAGTGGAAGGATAACGGGCCGGTGCTCTCCAAGTCCAACAAAAACCTAATGGGCTTCTGCAATTAAACCACCA
CTTTT