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Detailed information on CNT30506942


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30272829Nicotiana attenuataChenopodium quinoa26.7126.7191.4682forward
CNT30202525Nicotiana attenuataHelianthus annuus14.6621.2391.1145forward
CNT30724440Nicotiana attenuataLupinus angustifolius22.4822.7786.9669forward

Expression of CNT30506942

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MWWNIEPVQMAGFGWLNSGLPYPSSELGHVAQTKVWARLASKVEWTA*

>peptide 2 (43 aa)
MWPKRRYGPAWLLKWSGPREAGFTEQRIAPALSSGRIMGCCHL*

Sequence

>CNT30506942
GCCGAGCTCAGTAACGTGGGCTTGTAACCCAAGTGGGGGCATTAATGTGGTGGAATATTGAGCCTGTTCAGATGGCAGGGTTTGGGTGGCTAAATTCTGG
CCTGCCCTATCCAAGCTCAGAGTTGGGTCATGTGGCCCAAACGAAGGTATGGGCCCGCTTGGCTTCTAAAGTGGAGTGGACCGCGTGAGGCTGGTTTCAC
AGAGCAACGAATAGCTCCCGCTCTGTCCAGTGGAAGGATAATGGGCTGCTGTCATCTTTAAGCCCAATAAACGCCTGATGGCCTGCTCTAATTAAACCAC
CACTTTT