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Detailed information on CNT30506807


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30617222Nicotiana attenuataSesamum indicum4.0425.3786.9669forward
CNT3057972Nicotiana attenuataAmborella trichopoda7.3339.5687.2125forward

Expression of CNT30506807

Peptides detected in this lncRNA

>peptide 1 (54 aa)
MVNLEISGENHHLYQASTIISFIKLWGSPLTLRSMLHALGLVVVLDTGEPWRNW*

>peptide 2 (61 aa)
MTLWLIDKERKNSLISTSYLSIGEIKLLYILLWSTWRYQGKTIISIRRVQSYPSLNFGDRH*

>peptide 3 (32 aa)
MHLSPQCAYRTPIENPQKLYNLYVFWLTWQEK*

>peptide 4 (51 aa)
MGLSRGKQPLAEMQGKAAYDRPLWSGSSSDLAHYESLVHQVAFYFLNPQTS*

>peptide 5 (35 aa)
MELFFFEVKSPSMWKSEKVLSLLRNKKPSFPNTRI*

Sequence

>CNT30506807
CTTTTCTCTATATAAACATCTTAGGATGAACATTAACATATTCTTTGTTAGTCTTCTTAATAATGGTCCGATCTGATACTAGGAAGATGAACAAAAATCA
GAATCAGTCTAATCTTACTGTCCCTTGAAAGGAAATCATTAATGACGCTGTGGCTAATTGATAAGGAAAGGAAGAACAGTTTAATTTCAACCAGTTATCT
ATCAATAGGCGAGATCAAACTGTTATATATATTATTATGGTCAACTTGGAGATATCAGGGGAAAACCATCATCTCTATCAGGCGAGTACAATCATATCCT
TCATTAAACTTTGGGGATCGCCATTAACATTGAGGTCTATGTTACATGCACTCGGGCTGGTAGTGGTATTGGATACAGGGGAGCCTTGGCGTAATTGGTA
AAGTTGCTGTCATGTGACCAGGATGGGTTTGAGCCGCGGGAAACAACCTCTTGCAGAAATGCAGGGTAAGGCTGCGTACGATAGACCCTTGTGGTCCGGC
TCTTCCTCGGACCTCGCGCATTACGAAAGCTTAGTGCACCAGGTTGCCTTTTATTTCTTGAATCCGCAGACTAGCTAGCTGATCAGACTCTACAGGAATT
ATTAGTCAAAAGTCTTTACATTTTGCTTAAACTTCATTACAGTTACTATTAATGTAGGTGCTCCTTTTGTGGAGATGTACTGATCATTGAAAGCCCGAAA
GCTGCTTGTATATTTCAGCTTTATTCATTATTGGTATTAATTTTTAGAAAATGCAAACAGACTGTTTTGATACTACACAAGGGGAAAGGTTGGTTTAAAG
ACAAAGTGTTGTATTAGGGTGGATTATGGACCTGAATCTGGTAGTATGGAGCTTTTTTTTTTCGAAGTGAAATCCCCTAGTATGTGGAAGAGTGAAAAAG
TGCTTTCGTTATTGCGGAATAAAAAGCCTTCGTTTCCTAATACACGTATTTAATTTATTCGGAGCTATTAAAATGGGATCCAACTTTTGGGAAATATGAG
TCGAAGCAATAAGGACATCAATAGATCCAACTGAAGTCACTGCTAAGAGTTGTGAATTCGGATCCATCCAATCCCAAATTCGATCTCTAGATGTGAAAAA
ATTCTGGTAGAAAGCGCTTCCTTTTAATGCATTTGTCGCCCCAATGCGCCTACCGTACCCCGATTGAGAATCCACAAAAGTTGTACAATCTCTATGTTTT
TTGGTTGACTTGGCAAGAGAAGTAATAAATCTTTTCTTACAAGAGTTAGAAGTTAAAAATGCCAAAAATTACATTCAAAGGGAACAAACAATAGAAATAA
GTTCTAAATTGATAAAACAAAATTTTGGAGAAGACAAAAAAAAATTCATGGTGTTTAAAGAAATGTCAAACTATGGCTTAAAAACTTCTGAAGGATCAAA
TGTATGGTGAGTAGGATCCACCCGAACAAATTTTCAATTGTTATGTTATTTTCATAATTAGTTAGTGCAGAGCACAAAATTGCATCTCACTTTGTATTTG
GCTCTTCAATGAGTTAAAGCGACCTTTTTGTTATTGTAGTTCTTTTCCCAAAATTGTTGGATTTGTTAAACTTTCTTTACTTGTTTGGGCTAGGTAAAAG
ACTGAAGGGCCATTAGACCAAACAGCATCAAATGAGTATCATGCCATAAAATACTTATGTTACAAGATTAGCTGATGGTATTAATATTGAGAAATTTTCA
TAAACC