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Detailed information on CNT30506770


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30703316Nicotiana attenuataQuercus lobata22.6222.4891.369forward
CNT3044357Nicotiana attenuataPrunus dulcis34.134.2185.58104forward
CNT30561829Nicotiana attenuataActinidia chinensis23.6120.1790.2872forward
CNT30235726Nicotiana attenuataBrassica oleracea22.322.2289.7168forward
CNT30509808Nicotiana attenuataSolanum lycopersicum100100.3386.23305forward
CNT30262041Nicotiana attenuataBrassica rapa22.322.388.2468forward
CNT30647270Nicotiana attenuataRosa chinensis20.3320.291.9462forward
CNT3058191Nicotiana attenuataAmborella trichopoda2019.8788.5261forward
CNT3024649Nicotiana attenuataPopulus trichocarpa23.9324.1790.4173forward

Expression of CNT30506770

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MWWNVELFLKARLRVAYVWHALSKHGVESCGPNVSMGCLARRAGRTA*

Sequence

>CNT30506770
GCCGAGCCTTGTAACGTGGGCTTGTGACCCAAGTGGGGGCAATAATGTGGTGGAATGTTGAGTTGTTTCTGAAGGCTAGGCTTCGGGTGGCTTATGTCTG
GCATGCCCTATCCAAGCATGGAGTTGAGTCATGTGGCCCAAACGTAAGTATGGGCTGCTTGGCTCGTAGAGCGGGGCGGACTGCGTGAGGCTGGTTTCAC
AGAGCAACGAACAGCTCCCGCTCTGTGCAGTGGAAGGATAACGGGCTGGTGCTCTTCAAGTCCAACAAAAACCTGATGGGCTTCTCCAATTAAACCACCA
CTTTT