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Detailed information on CNT30506121


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONSLYT000794, E-value = 2e-156

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30549166Nicotiana attenuataIpomoea triloba80.6849.782.93334forward
CNT30403468Nicotiana attenuataBeta vulgaris85.0245.4880.68352forward
CNT30524932Nicotiana attenuataPhaseolus vulgaris67.8759.9180.43281forward
CNT30490956Nicotiana attenuataOlea europaea43.4842.8683.33180forward
CNT3091613Nicotiana attenuataSolanum tuberosum98.7954.191.93409forward
CNT30234716Nicotiana attenuataBrassica oleracea36.7156.0982.89152forward
CNT30311681Nicotiana attenuataCamelina sativa72.2241.6481.61299forward
CNT30608057Nicotiana attenuataGossypium raimondii46.1432.2184.29191forward
CNT30216752Nicotiana attenuataKalanchoe fedtschenkoi37.4433.4884.52155forward
CNT30713436Nicotiana attenuataMalus domestica golden33.8243.4883.57140forward
CNT30625547Nicotiana attenuataDaucus carota47.8319.0885.35198forward
CNT30642028Nicotiana attenuataCannabis sativa64.2551.9581.2266forward
CNT30109704Nicotiana attenuataOryza longistaminata52.6639.2182.11218forward
CNT30103004Nicotiana attenuataOryza rufipogon59.1824.5782.45245forward
CNT30497905Nicotiana attenuataDigitaria exilis64.9829.7981.78269forward
CNT30114394Nicotiana attenuataFicus carica42.7529.7583.05177forward
CNT30335475Nicotiana attenuataCynara cardunculus41.7913.3287.86173forward

Expression of CNT30506121

Peptides detected in this lncRNA

>peptide 1 (67 aa)
MQEKWDYMMEKWDYNLVRWGYMKARWGCMKVKWGCKMAKWGCKMEKWGCRQARWGCRQAKWGCRQAK*

>peptide 2 (29 aa)
AVWTRRRQLWTGWRICKGGAVSRRGIVTW*

Sequence

>CNT30506121
GGCTGTATGGACTAGACGGAGACAGCTTTGGACTGGTTGGCGAATATGCAAGGGAGGGGCTGTATCTCGCCGAGGGATTGTAACTTGGTGATGTAGGACT
ATATGATGGTGATGTTGGGCTGTAACTGGGAGATGTTGGGCTGTAACCAGGGGAGGTAGGACTGTATGCAGGAGAAGTGGGACTATATGATGGAGAAGTG
GGACTATAACTTGGTGAGGTGGGGCTATATGAAGGCGAGGTGGGGCTGTATGAAGGTGAAGTGGGGCTGTAAGATGGCGAAGTGGGGCTGTAAGATGGAG
AAGTGGGGCTGTAGGCAGGCGAGGTGGGGCTGTAGGCAGGCGAAGTGGGGCTGTAGGCAGGCGAAGTAGGGCTATAGCTAGGCGATGTTGGGCTATAACT
AGGAGATGTAGGGC