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Detailed information on CNT30505774


BLAST search results

BLAST vs Swiss-Prot:
sp|P29302|PSAD_NICSY, E-value = 6e-60

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30639185Nicotiana attenuataNymphaea colorata52.7259.0279.37252forward
CNT30515273Nicotiana attenuataJuglans regia46.6534.7982.51223forward
CNT30376473Nicotiana attenuataArabidopsis thaliana47.4932.3481.5227forward
CNT30269143Nicotiana attenuataChenopodium quinoa36.1922.2784.39173forward
CNT30380146Nicotiana attenuataManihot esculenta55.4420.6981.51265forward
CNT30403648Nicotiana attenuataBeta vulgaris36.1915.685.55173forward
CNT30525887Nicotiana attenuataPhaseolus vulgaris22.829.1484.4109forward
CNT30630495Nicotiana attenuataVigna unguiculata47.9140.3982.97229forward
CNT30710333Nicotiana attenuataGlycine max51.2628.1683.67245forward
CNT3094391Nicotiana attenuataSolanum tuberosum19.0420.8285.7191forward
CNT3089114Nicotiana attenuataVigna radiata47.4923.682.38227forward
CNT30171560Nicotiana attenuataTrifolium pratense40.3823.9584.46193forward
CNT30145745Nicotiana attenuataMedicago truncatula49.3763.2782.63236forward
CNT3061459Nicotiana attenuataArabidopsis lyrata46.8638.2381.7224forward
CNT30611231Nicotiana attenuataArabis alpina26.1521.7481.6125forward
CNT30651308Nicotiana attenuataRosa chinensis40.3833.5187.05193forward
CNT30477818Nicotiana attenuataArabidopsis halleri43.3144.2381.64207forward
CNT30619829Nicotiana attenuataCajanus cajan47.9123.2381.66229forward
CNT30358483Nicotiana attenuataLactuca sativa51.6737.7780.57247forward
CNT30411270Nicotiana attenuataPapaver somniferum51.2643.6782.45245forward
CNT30570681Nicotiana attenuataVitis vinifera22.187.7582.08106forward
CNT3049718Nicotiana attenuataCucumis sativus36.8233.7282.39176forward

Expression of CNT30505774

Peptides detected in this lncRNA

>peptide 1 (51 aa)
MAIEELLARKVEEMEMYLCRMRMREESSFFVIQIYVVEIRILDRVIHIQTN*

Sequence

>CNT30505774
CCCTGTAAAACCTGTAGTTAATCTTGTACTTTGACCTAAGCCTAGTACCAAGTGCTAAACACTGCTCTTTCCTCGCCAATTTCAGCAAATTAGCACCTTC
CCTCATAATAGCTGCACCACCAGTTGGCATCTCAAAGATCTGTTCTTTAGGCGATTCCCAAGTAATTACGTAAAACTCCTCAACTTGGGCCTTGCGGAGA
AGCCCACCGGTGCTGCCGCCGAAGATTGGGGAAGGTGTGTTTGGGTCCAATTGTGGTGGAGTGAAGAGAGAAGCTTGAGTTGCCATGGCCATTGAAGAAT
TATTGGCTAGAAAAGTGGAGGAAATGGAGATGTATTTGTGCAGAATGAGAATGAGAGAAGAGAGTTCATTTTTTGTTATTCAGATATATGTGGTGGAGAT
AAGGATATTGGATAGGGTTATTCACATACAGACCAATTAGAAGGTCTGATTTTGATACGCATTCTAACCAAGTAAGTG