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Detailed information on CNT30505570


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG83|UBIQP_HORVU, E-value = 7e-91

BLAST vs NONCODE:
NONMEST001181, E-value = 9e-113

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30546718Nicotiana attenuataIpomoea triloba20.7373.1385.46392forward
CNT30615967Nicotiana attenuataSesamum indicum22.4712.6486.82425forward
CNT30381257Nicotiana attenuataManihot esculenta2363.4185.75435forward
CNT30637294Nicotiana attenuataCapsicum annuum22.6355.6689.02428forward
CNT3096742Nicotiana attenuataSolanum tuberosum2337.9388.05435forward

Expression of CNT30505570

Peptides detected in this lncRNA

>peptide 1 (93 aa)
KGGLLLDVVVGKSAPILKLLSSKDQPLLIWRDAFFVLDLRLNIVNGVGALNLKGDGLPSQSFHKNLHATTQTEDKVKGGFLLDVVVCKSAAIL*

>peptide 2 (44 aa)
MPSLSWIFALTLSMVSELSTSRVMVFPVKVFTKICMPPRRRRTR*

>peptide 3 (30 aa)
MLWFNSPGLNIKYTTKVVITFKKDPQPWIS*

>peptide 4 (31 aa)
MPDKISNRMDCISKNKAFHSTVICLDAHIQG*

>peptide 5 (35 aa)
MFFNTEGHCTFCQLWPENKLKNSLITPLNFISHLV*

>peptide 6 (36 aa)
MQNQELSAEDKDILHSVHLTYFNLCENILKFKYNAR*

>peptide 7 (41 aa)
EGWTPSGCCSRQECAHPQAAFQQRSTSADLEGCLLCPGSSP*

Sequence

>CNT30505570
TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCAAGAGTGCGCCCATCCTCAAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGATCTGGAGGGATGC
CTTCTTTGTCCTGGATCTTCGCCTTAACATTGTCAATGGTGTCGGAGCTCTCAACCTCAAGGGTGATGGTCTTCCCAGTCAAAGTTTTCACAAAAATCTG
CATGCCACCACGCAGACGGAGGACAAGGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCTGCAAGAGTGCGGCCATCCTCTAGCTGCTTTCCAGCAAAG
ATCAACCTCTGCTGATCGGGAGGAATTCCTTCCTTGTCCTGAATCTTAGCCTTGACATTATCAATAGTGTCGGAACTCTCAACCTCGAGAGTAATGGTTT
TTCCGGTGAGTGTCTTTACAAAGATTTGCATCTGTAATCACACCAAATAAAGGGGGGCAATAGACATAACAGAAAACTTATCATATTTCACATTTTATTA
TACTAACAGAAGCAGAACCAAGATCAAGCATATACAAACATTGTGTATAATTCCCAGTAAGAACACTAAACGGGCTTGAGATTTTTTATTAAGTAACAGT
ATTCACATTAAAAAGGCAAATATGATATGCAAAACCAAGAGCTATCAGCAGAAGATAAAGATATACTTCACTCAGTACATCTGACCTATTTCAACCTGTG
CGAAAATATACTAAAATTTAAGTACAATGCCAGATAAGATTAGTAACAGAATGGACTGCATTTCAAAGAATAAAGCTTTTCACTCTACAGTAATATGTTT
AGATGCACATATACAAGGCTAATCTTCTGAATCACATGAAAAGTTTGAACTAATTCAATCACATTATAAAGAACAATGATCCAATATTGTCGTTCAGCCA
ACATACTTATATGCTGAAAGAATGCTTTGGTTCAATAGTCCAGGGCTCAACATCAAATACACCACAAAAGTAGTGATAACTTTTAAAAAAGACCCGCAAC
CTTGGATTTCCTAATCCATGTCATTATACTACATTTTAATCTGTTTCTTTTAATAGTAACCATTTCTTCTATTGCATTAGATAGCCATTTTCACTTCTTT
TAATATGTACGTCTAAATTACTTATACTATCATAATATAAGGACCTAGAAATAAGTATGCTGCCACCACCCCTGCAACCTAAATGTTTTTCAACACCGAA
GGTCATTGCACATTTTGTCAGCTTTGGCCAGAAAACAAATTGAAGAATTCACTAATAACTCCATTAAATTTTATATCCCACCTGGTATAGATCTAATTGA
CGACACTAAAACTAAAACACCCATCAATTCATGTTCTCACTAATAAAAAAATCAAACAAGGAGCAAAACAGCACATACACACATGAATCAAGACCCAAAC
ACCATCGAAAATGACAATTAACAAAACCAAAAGTGGATTCAATCTACGTCAGCGCAACTCATGTAAACCTTGAGCTGTTCTTATATACTCTCTGTTTCAA
TTTAGATAAATCTATTACTATTTGGGGGAATCAAACAAGGTTTACTTTGACCACGTATTTTGCATAAATTATTTAAATATTTTAAATTGATAACTATTTT
GACTTATATACTTTTTATATAGTTCCTATAAATATGTAGATTTTATTTCAAAATTTTTGAAAATTCCATGTCTAAATTCACACCGAAAATTAGTTAGTTT
GACCCTCCTACCAGACCGAAAAGGTTAACATGGAAGGAATATAAGATTTTGACCCCATTATAAACAAAACTAAACTTACCCTAAAGAGGATAAATTGAGA
TCTAGTCATCTAATAAACAACTCAAACAAATTACTTGAAGAATTAACAAAAAAAATACTTGAAAGTTCATTAGGGCCTCGATCAATATCAC