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Detailed information on CNT30505431


BLAST search results

BLAST vs Swiss-Prot:
sp|Q3BAI2|YCX91_PHAAO, E-value = 4e-14

BLAST vs NONCODE:
NONSLYT003133, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30299883Nicotiana attenuataTriticum aestivum45.8752.18951099forward

Expression of CNT30505431

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MMSMARGRALNGLGWLHFALPTPGKLRIQA*

>peptide 2 (45 aa)
MSNEKSCEKHDRLPVEGFLRSVNLRRVNRSLRNPRKGCRPMGTRK*

>peptide 3 (50 aa)
MTTRRWAWKQPSFEESVIAHWSSSMAPKMYQGSSDSPKRRDLESCFFKCQ*

Sequence

>CNT30505431
GCCGCCCTTTAAAGGAGCGGGCGCAGTGAACTGTAATTGTGAAAAGATTGGAAGATCTGGCCAAAGAAGGTGATAGCCCTGTAGATTCGTTCCCATGGTT
CGATCCTTCCCAGTAAAACGCGGCGTGTTCGAATTCTGATCGCTTTTACGCGAGAAAGGGGGACCACCCTCTAAGCCTAAGTATTCCTCAATGACCGATA
GCGTACAAGTACCGTGAGGGAAAGGTGAAAAGAACCCTATTTAGGGAGTGCAATAGAGAACCTGAGATCCGATGCGAACAATCAGTCGAAGGAGCGGAGC
TTAGAGCCTTTACTTTATGTAAAGCGCACTCACTCTAACGGCGTACCTTTTGCATGATGGGTCAGCGAGGAAATGGGAACAGCGGCTTAAGCCATTAGGT
GTAGGCGCTTTCCAGAGGTGGAATCTTCTAGTTCTTCCTATTTGACCCGAAACCGATCGATCTAGCCATGAGCAGGTTGAAGAGAGCTCTAACAGGCCTT
GGAGGACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGGGTGAAAGGCCAACCAAGATCGGATATAGCTGGTTGAAGAGAGCTCTA
ACAGGCCTTGGAGGACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGAGTGAAAGGCCAACCAAGATCGGATATAGCTGGTTTTCC
GCGAAATCTATTTCAGTAGAGCGTATGATGTCGATGGCCCGAGGTAGAGCACTCAATGGGCTAGGGTGGCTTCATTTCGCCTTACCAACCCCAGGGAAAC
TCCGAATACAGGCCTAGATCATTTGTACAGACAGACTTTTTGGGTGCTAAGATCCAAAGTCGAGAGGGAAACAGCCCAGATCGTACGCTAAGGTCCCTAA
GCAATCACTTAGTGGAAAAGGAAGTGATCGAGCGATGACAACCAGGAGGTGGGCTTGGAAGCAGCCATCCTTTGAAGAAAGCGTAATAGCTCACTGGTCT
AGCTCCATGGCACCGAAAATGTATCAGGGCTCAAGTGATTCACCGAAGCGACGAGACCTTGAAAGCTGCTTTTTCAAGTGTCAGTAGCGGAACGTTCTGT
CAATCGGGGAAGGTTTTTGGTGACAAGACCTGGAGATATCAGAAGTGAGAATGCTGACATGAGTAACGAAAAATCCTGTGAAAAACACGATCGCCTGCCA
GTGGAAGGTTTTCTGCGTTCAGTCAATCTACGCAGAGTGAATCGGTCCCTAAGGAACCCCCGAAAGGGCTGCCGTCCGATGGGTACACGAAAGTGACGAA
GTTGCTTTGACTACAGAACCATGCCTGTCTGTTGGAGCGAATTGGATGATCGGGCCGAGGGCTGCCCCCTCTTCCCCTCACTCTCCTTTCCCTAATATGA
ACCTTGAGTCATCAAAGCCTTTCTGACTCGGCCTGGCCCAGTCGCCCTACGCGACTGGCGCTTCAAAAGGCGAAACTCTCGGTCGTAGTTTGGCGACCTA
TCTTCAGTAGGGGCCTTTAGTCTTTTGATTAGAGTAGGGGTCGCGAGAGAGCAGAGCGTACCGCCCTGCCATAGTCACGAGTCTGTTTATAGTCGCGACT
GTTGTCATAGTCAACAAGGTTGAAACTTCCAGGAAAAAACTTCGAATTGGGAGGGCGATCCTCCCGGTGAACTGACCGTACCCCAAACCGACACAGGTGA
ACAAGTAGAGTATACTAGGGCGCTTGAGAGAACCATGTCGAAGGAACTCGGCAAAATGACCCCGTAACTTCGGGAGAAGGGGTGCTCTCCTATCTTTTGA
TTAGGAAAGCGGCACATACCAGGGGGTAGCGACTATTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGATGTATAGAGTCTGACACCTGCCCGGT
GCTGGAAGGTCGGAAGGAGAAGTGTTATAAGCTTTGAATGGAAGCCCCGGTAAACGGCGGCAGTAACTCTAACTGTCCTAAGGTAGCGAAATTCCTTGTC
GCATAAGTAGCGACCTGCACGAATGGTGTAACGACTGCCCCGCTGTCTCCGACATGGACCCGGTGAAATTGAATTCTCCGTGAAGATGCGGAGTACCAAC
GGCTAGACGGTAAGACCCCGTGCACCTTAACTATAGCTTCACAGTGACAACCTTAATCGAATGTGTAGGATAGGTGGGAGGTGGTGACACACAACGACCA
ATCCTGAAAGACCACTCTTTCGTCTAAGGATGCCTAACCGCCGGACCGATCATTCGGGGGGAGGCGGGACACTGCGAGGTGGGTAGTTTATCTGGGGCGG
ATGCCTCCTAAAGAGTAACGGAGGTGTGCGAAGGTAGGCTCAAGCTAAGATTCTGCTCGTGAGCGTAATGGTATAAGCCTGCCTGACTGTGAGACC