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Detailed information on CNT30505428


BLAST search results

BLAST vs Swiss-Prot:
sp|P93276|M030_ARATH, E-value = 2e-34

BLAST vs NONCODE:
NONSLYT003133, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30550219Nicotiana attenuataIpomoea triloba92.6965.1197.912827forward
CNT30490123Nicotiana attenuataOlea europaea46.4381.3394.141416forward
CNT30216563Nicotiana attenuataKalanchoe fedtschenkoi6248.6293.441891forward

Expression of CNT30505428

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MSNEKSCEKHDRLPVEGFLRSVNLRRVNRSLRNPRKGCRPMGTRK*

>peptide 2 (50 aa)
MTTRRWAWKQPSFEESVIAHWSSSMAPKMYQGSSDSPKRRDLESCFFKCQ*

>peptide 3 (43 aa)
KRMHWMDARALRRKDAFRGERPWGDTVCDPWISDRETVSKLRG*

>peptide 4 (30 aa)
MMSMARGRALNGLGWLHFALPTPGKLRIQA*

Sequence

>CNT30505428
CGAAAAGAATGCATTGGATGGATGCCCGGGCATTGAGAAGGAAGGACGCTTTCAGAGGCGAAAGGCCATGGGGAGATACCGTCTGTGATCCATGGATCTC
CGATCGGGAAACCGTATCCAAGCTCCGTGGCTAGTCTGCGCTCTTTGGACTTTTCAAACTTAGCGAACTGAAACATCTTAGTAGCTAAAGGAAGGGAAAT
CAACCGAGACCCCGTTAGTAGCGGCGAGCGAAAGGCCATGGGGAGATACCGTCTGTGATCCATGGATCTCCGATCGGGAAACCGTATCCAAGCTCCGTGG
CTAGTCTGCGCTCTTTGGACTTTTCAAACTTAGCGAACTGAAACATCTTAGTAGCTAAAGGAAGGGAAATCAACCGAGACCCCGTTAGTAGCGGCGAGCG
AGAGCGGATTGGGGGTTTGAAGAAAAACAAACACGAAGCTTCGTTCCTCAGCAAAGTGTTCACTTCTTTTTCGCCAGGTTTCATTCGATTTGTTGTGGAT
TGGATGATGGAAAAACCAGCAAGCTACGGCTTCAAAGCTTACCTTATTTAGAAAAGGAGAAAGGGCTTTTTTATAGATGTTGAGGTTGAGTAAGGGGGGC
GGAGCTTGAAGAGCGAAGCGAGCCGCGCTAGCCTAGCAACGTTTTTCAGCAGCAAGCTACGGTCTAACGACCCCCTAACCTAGGTTGGGGCGAAAACTCC
AAAATCCAAAACGTTGGTTAGGGTTCCAAACCTTTCTCTAATAATAAGGTAAGCTTTCAAGCCGCCGCCCTTTAAAGGAGCGGGCGCAGTGAACTGTAAT
TGTGAAAAGATTGGAAGATCTGGCCAAAGAAGGTGATAGCCCTGTAGATTCGTTCCCATGGTTCGATCCTTCCCAGTAAAACGCGGCGTGTTCGAATTCT
GATCGCTTTTACGCGAGAAAGGGGGACCACCCTCTAAGCCTAAGTATTCCTCAATGACCGATAGCGTACAAGTACCGTGAGGGAAAGGTGAAAAGAACCC
TATTTAGGGAGTGCAATAGAGAACCTGAGATCCGATGCAAACAATCAGTCGAAGGAGCGGAGCTTAGAGCCTTTACTTTATGTAAAGCGCACTCACTCTA
ACGGCGTACCTTTTGCATGATGGGTCAGCGAGGAAATGGGAACAGCGGCTTAAGCCATTAGGTGTAGGTGCTTTCCAGAGGTGGAATCTTCTAGTTCTTC
CTATTTGACCCGAAACCGATCGATCTAGCCATGAGCAGGTTGAAGAGAGCTCTAACAGGCCTTGGAGGACCGAACCCACGTATGTGGCAAAATACGGGGA
TGACTTGTGGCTAGGAGTGAAAGGCCAACCAAGATCGGATATAGCTGGTTTTCCGCGAAATCTATTTCAGTAGAGCGTATGATGTCGATGGCCCGAGGTA
GAGCACTCAATGGGCTAGGGTGGCTTCATTTCGCCTTACCAACCCCAGGGAAACTCCGAATACAGGCCTAGATCATTTGTACAGACAGACTTTTTGGGTG
CTAAGATCCAAAGTCGAGAGGGAAACAGCCCAGATCGTACGCTAAGGTCCCTAAGCAATCACTTAGTGGAAAAGGAAGTGATCGAGCGATGACAACCAGG
AGGTGGGCTTGGAAGCAGCCATCCTTTGAAGAAAGCGTAATAGCTCACTGGTCTAGCTCCATGGCACCGAAAATGTATCAGGGCTCAAGTGATTCACCGA
AGCGACGAGACCTTGAAAGCTGCTTTTTCAAGTGTCAGTAGCGGAACGTTCTGTCAATCGGGGAAGGTTTTTGGTGACAAGACCTGGAGATATCAGAAGT
GAGAATGCTGACATGAGTAACGAAAAATCCTGTGAAAAACACGATCGCCTGCCAGTGGAAGGTTTTCTGCGTTCAGTCAATCTACGCAGAGTGAATCGGT
CCCTAAGGAACCCCCGAAAGGGCTGCCGTCCGATGGGTACACGAAAGTGACGAAGTTGCTTTGACTACAGAACCATGCCTGTCTGTTGGAGCGAATTGGA
TGATCGGGCCGAGGGCTGCCCCCTCTTCCCCTCACTCTCCTTTCCCTAATATGAACCTTGAGTCATCAAAGCCTTTCTGACTCGGCCTGGCCCAGTCGCC
CTACGCGACTGGCGCTTCAAAAGGCGAAACTCTCGGTCGTAGTTTGGCGACCTATCTTCAGTAGGGGCCTTTAGTCTTTTGATTAGAGTAGGGGTCGCGA
GAGAGCAGAGCGTACCGCCCTGCCATAGTCACGAGTCTGTTTATAGTCGCGACTGTTGTCATAGTCAACAAGGTTGAAACTTCCAGGAAAAAACTTCGAA
TTGGGAGGGCGATCCTCCCGGTGAACTGACCGTACCCCAAACCGACACAGGTGAACAAGTAGAGTATACTAGGGCGCTTGAGAGAACCATGTCGAAGGAA
CTCGGCAAAATGACCCCGTAACTTCGGGAGAAGGGGTGCTCTCCTATCTTTTGATTAGGAAAGCGGCACATACCAGGGGGTAGCGACTATTTATTAAAAA
CACAGGACTCTGCTAAGTGGTAACACGATGTATAGAGTCTGACACCTGCCCGGTGCTGGAAGGTCGGAAGGAGAAGTGTTATAAGCTTTGAATGGAAGCC
CCGGTAAACGGCGGCAGTAACTCTAACTGTCCTAAGGTAGCGAAATTCCTTGTCGCATAAGTAGCGACCTGCACGAATGGTGTAACGACTGCCCCGCTGT
CTCCGACATGGACCCGGTGAAATTGAATTCTCCGTGAAGATGCGGAGTACCAACGGCTAGACGGTAAGACCCCGTGCACCTTAACTATAGCTTCACAGTG
ACAACCTTAATCGAATGTGTAGGATAGGTGGGAGGTGGTGACACACAACGACCAATCCTGAAAGACCACTCTTTCGTCTAAGGATGCCTAACCGCCGGAC
CGATCATTCGGGGGGAGGCGGGACACTGCGAGGTGGGTAGTTTATCTGGGGCGGATGCCTCCTAAAGAGTAACGGAGGTGTGCGAAGGTAGGCTCAAGCT
AAGATTCTGCTCGTGAGCGTAATGGTATAAGCCTGCCTGACTGTGAGACC