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Detailed information on CNT30505422


BLAST search results

BLAST vs Swiss-Prot:
sp|Q3BAI2|YCX91_PHAAO, E-value = 4e-14

BLAST vs NONCODE:
NONSLYT003133, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30712870Nicotiana attenuataGlycine max27.8844.6597.71742forward
CNT30157615Nicotiana attenuataPistacia vera17.4463.2295.91464forward
CNT3092080Nicotiana attenuataSolanum tuberosum12.8158.49100341forward
CNT30511493Nicotiana attenuataSolanum lycopersicum11.534.23100306reverse complement
CNT30147386Nicotiana attenuataMedicago truncatula36.8763.6297.15981forward
CNT3082633Nicotiana attenuataBrassica juncea11.8495.7496.51315forward
CNT3038420Nicotiana attenuataCucumis melo36.5768.1496.3973forward
CNT30113381Nicotiana attenuataFicus carica16.7610095.96446reverse complement

Expression of CNT30505422

Peptides detected in this lncRNA

>peptide 1 (50 aa)
MTTRRWAWKQPSFEESVIAHWSSSMAPKMYQGSSDSPKRRDLESCFFKCQ*

>peptide 2 (32 aa)
SICCGLDDGKTSKLRLQSLPYLEKEKGLFYRC*

>peptide 3 (45 aa)
MSNEKSCEKHDRLPVEGFLRSVNLRRVNRSLRNPRKGCRPMGTRK*

>peptide 4 (30 aa)
MMSMARGRALNGLGWPHFALPTPGKLRIQA*

Sequence

>CNT30505422
TCGATTTGTTGTGGATTGGATGATGGAAAAACCAGCAAGCTACGGCTTCAAAGCTTACCTTATTTAGAAAAGGAGAAAGGGCTTTTTTATAGATGTTGAG
GTTGAGTAAGGGGGGCGGAGCTTGAAGAGCGAAGCGAGCCGCGCTAGCCTAGCAACGTTTTTCAGCAGCAAGCTACGGTCTAACGACCCCCTAACCTAGG
TTGGGGCGAAAACTCCAAAATCCAAAACGTTGGTTAGGGTTCCAAACCTTTCTCTAATAATAAGGTAAGCTTTCAAGCCGCCGCCCTTTAAAGGAGCGGG
CGCAGTGAACTGTAATTGTGAAAAGATTGGAAGATCTGGCCAAAGAAGGTGATAGCCCTGTAGATTCGTTCCCATGGTTCGATCCTTCCCAGTAAAACGC
GGCGTGTTCGAATTCTGATCGCTTTTACGCGAGAAAGGGGGACCACCCTCTAAGCCTAAGTATTCCTCAATGACCGATAGCGTACAAGTACCGTGAGGGA
AAGGTGAAAAGAACCCTATTTAGGGAGTGCAATAGAGAACCTGAGATCCGATGCGAACAATCAGTCGAAGGAGCGGAGCTTAGAGCCTTTACTTTATGTA
AAGCGCACTCACTCTAACGGCGTACCTTTTGCATGATGGGTCAGCGAGGAAATGGGAACAGCGGCTTAAGCCATTAGGTGTAGGCGCTTTCCAGAGGTGG
AATCTTCTAGTTCTTCCTATTTGACCCGAAACCGATCGATCTAGCCATGAGCAGGTTGAAGAGAGCTCTAACAGGCCTTGGAGGACCGAACCCACGTATG
TGGCAAAATACGGGGATGACTTGTGGCTAGGGGTGAAAGGCCAACCAAGATCGGATATAGCTGGTTTTCCGCGAAATCTATTTCAGTAGAGCGTATGATG
TCGATGGCCCGAGGTAGAGCACTCAATGGGCTAGGGTGGCCTCATTTCGCCTTACCAACCCCAGGGAAACTCCGAATACAGGCCTAGATCGTTTGTACAG
ACAGACTTTTTGGGTGCTAAGATCCAAAGTCGAGAGGGAAACAGCCCAGATCGTACGCTAAGGTCCCTAAGCAATCACTTAGTGGAAAAGGAAGTGATCG
AGCGATGACAACCAGGAGGTGGGCTTGGAAGCAGCCATCCTTTGAAGAAAGCGTAATAGCTCACTGGTCTAGCTCCATGGCACCGAAAATGTATCAGGGC
TCAAGTGATTCACCGAAGCGACGAGACCTTGAAAGCTGCTTTTTCAAGTGTCAGTAGCGGAACGTTCTGTCAATCGGGGAAGGTTTTTGGTGACAAGACC
TGGAGATATCAGAAGTGAGAATGCTGACATGAGTAACGAAAAATCCTGTGAAAAACACGATCGCCTGCCAGTGGAAGGTTTTTGGTGACAAGACCTGGAG
ATATCAGAAGTGAGAATGCTGACATGAGTAACGAAAAATCCTGTGAAAAACACGATCGCCTGCCAGTGGAAGGTTTTCTGCGTTCAGTCAATCTACGCAG
AGTGAATCGGTCCCTAAGGAACCCCCGAAAGGGCTGCCGTCCGATGGGTACACGAAAGTGACGAAGTTGCTTTGACTACAGAACCATGCCTGTCTGTTGG
AGCGAATTGGATGATCGGGCCGAGGGCTGCCCCCTCTTCCCCTCACTCTCCTTTCCCTAATATGAACCTTGAGTCATCAAAGCCTTTCTGACTCGGCCTG
GCCCAGTCGCCCTACGCGACTGGCGCTTCAAAAGGCGAAACTCTCGGTCGTAGTTTGGCGACCTATCTTCAGTAGGGGCCTTTAGTCTTTTGATTAGAGT
AGGGGTCGCGAGAGAGCAGAGCGTACCGCCCTGCCATAGTCACGAGTCTGTTTATAGTCGCGACTGTTGTCATAGTCAACAAGGTTGAAACTTCCAGGAA
AAAACTTCGAATTGGGAGGGCGATCCTCCCGGTGAACTGACCGTACCCCAAACCGACACAGGTGAACAAGTAGAGTATACTAGGGCGCTTGAGAGAACCA
TGTCGAAGGAACTCGGCAAAATGACCCCGTAACTTCGGGAGAAGGGGTGCTCTCCTATCTTTTGATTAGGAAAGCGGCACATACCAGGGGGTAGCGACTA
TTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGATGTATAGAGTCTGACACCTGCCCGGTGCTGGAAGGTCGGAAGGAGAAGTGTTATAAGCTTT
GAATGGAAGCCCCGGTAAACGGCGGCAGTAACTCTAACTGTCCTAAGGTAGCGAAATTCCTTGTCGCATAAGTAGCGACCTGCACGAATGGTGTAACGAC
TGCCCCGCTGTCTCCGACATGGACCCGGTGAAATTGAATTCTCCGTGAAGATGCGGAGTACCAACGGCTAGACGGTAAGACCCCGTGCACCTTAACTATA
GCTTCACAGTGACAACCTTAATCGAATGTGTAGGATAGGTGGGAGGTGGTGACACACAACGACCAATCCTGAAAGACCACTCTTTCGTCTAAGGATGCCT
AACCGCCGGACCGATCATTCGGGGGGAGGCGGGACACTGCGAGGTGGGTAGTTTATCTGGGGCGGATGCCTCCTAAAGAGTAACGGAGGTGTGCGAAGGT
AGGCTCAAGCTAAGATTCTGCTCGTGAGCGTAATGGTATAAGCCTGCCTGACTGTGAGACC