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Detailed information on CNT30504976


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30395031Nicotiana attenuataTriticum turgidum73.5952.8199.01404reverse complement
CNT30655385Nicotiana attenuataRosa chinensis73.7717.298.77405reverse complement
CNT30369805Nicotiana attenuataOryza glumipatula63.5724.3496.28349reverse complement

Expression of CNT30504976

Peptides detected in this lncRNA

>peptide 1 (76 aa)
SEEHLPPRLTAAASTELAGASSSSPVMIAHSTKELYKRHCPSSLTRYCWIGLSPIVQDSPLLPPVGVRAVSQSQCG*

Sequence

>CNT30504976
TTCCGAAGAACACTTGCCCCCCCGTCTTACCGCGGCTGCTAGCACGGAGTTAGCCGGGGCTTCTTCCTCGAGTCCTGTCATGATCGCGCACTCGACGAAA
GAGCTTTACAAGCGGCATTGCCCTTCTTCACTCACGCGATATTGTTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAG
TCCGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTTACCTGACCAACTACCTAATACTA
CGCAGGCTCATCAAACAGCGCTTTTTAGCTTTCTTCAGGATTTGGCCCGAACTGTTCGGCAGATTCCCACGCGTTACGCACCCGTTCGCCACTTTGTTCT
CAACCCTTCTCACCTCCTGGGCGAGACAAGCTACCTTTAGCTAGGAGCCTCTTTTCCTTCTGCCCAGCTCCCCGAAAACAACGTTCGACTTGCATGTGTT
AAGCATATAGCTAGCGTTCCTTCTGAGCCAGGATCAAACTCTTCTTTTG