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Detailed information on CNT30504654


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30547627Nicotiana attenuataIpomoea triloba22.046.6391.0467reverse complement
CNT3053206Nicotiana attenuataAmborella trichopoda20.0719.9388.5261forward

Expression of CNT30504654

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MWWNVRLILKAGLQIANAWLALSKHGVESCGPNESMGFLAPRVGWTA*

>peptide 2 (60 aa)
MLGLPYPSMELSHVAQTKVWASWLLEWGGLREAGFTEQRRTPALCSGRITGRCYSSPTNT*

Sequence

>CNT30504654
GCCGAGCCTGGTAACATGGGCTTGTAACCTATGTAGGGGCAATAATGTGGTGGAATGTTAGATTGATCTTGAAGGCTGGGCTTCAAATAGCTAATGCTTG
GCTTGCCCTATCCAAGCATGGAGTTGAGTCATGTGGCCCAAACGAAAGTATGGGCTTCTTGGCTCCTAGAGTGGGGTGGACTGCGTGAGGCTGGTTTCAC
AGAGCAACGAAGAACTCCTGCTCTATGCAGTGGAAGGATAACGGGCCGGTGCTATTCAAGTCCAACAAACACCTGATGGGCAACCTAATTAAATCATCAC
TTTT