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Detailed information on CNT30504398


BLAST search results

BLAST vs Swiss-Prot:
sp|Q332V2|CLPP_LACSA, E-value = 4e-58

BLAST vs NONCODE:
NONCSAT000277, E-value = 2e-54

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30632291Nicotiana attenuataVigna unguiculata13.3621.5783.74203forward
CNT3090302Nicotiana attenuataSolanum tuberosum10.3424.892.99157reverse complement
CNT30597766Nicotiana attenuataFraxinus excelsior22.1969.6391.69337forward
CNT30203008Nicotiana attenuataHelianthus annuus20.0827.791.48305reverse complement
CNT3057113Nicotiana attenuataAmborella trichopoda24.6913.0687.2375forward
CNT3039143Nicotiana attenuataCucumis melo20.1427.5288.56306reverse complement

Expression of CNT30504398

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MNSNHRYLTNPIGFFLNGAWILHFFSPTKPTINYSN*

>peptide 2 (32 aa)
MRLLMHTVQKKCESMYRFQSSFFFSRKVLSYF*

>peptide 3 (57 aa)
MDIWSHKLHSIINSHPRYYPAPRRVYKQIQIFGLILDTEIYHKTNKLIRNLAINLLA*

Sequence

>CNT30504398
TCGTACTCTTTCATAACATAAATATTGTTAAGAACTCTCCGGCATGAAAACAAAAAAGTTTGTGACGCTGAACTGAACTCCCGATAGATAAGAGAAAATC
GGAAATACCCCTTATCTCATACTACTCTCTCGATACAGAATCTAATGTTTTGAAGAAAAAAACAATACAAAAATTTCTCATATCGAATTCGAAGTGCCAT
GCTATTATTACTTAGTATTCATATGGCGAAGGCATAGTCTTCTTTTTTCTCTCAAATAAAAACCTCATTGGCGCCAAGCGTGAGGGAATGCTAGACGTTT
GGTAATTTCTCCTCCGACCAGGATAAAAGATCCCATTGAAGCGGCTAATCCCATGCATATTGTATGGACATCTGGTCGCACAAATTGCATAGTATCATAA
ATAGCCACCCCAGGTATTACCCAGCCCCCAGGAGAGTTTATAAACAAATACAGATCTTTGGTCTCATCCTCGATACTGAGATATACCATAAGACCAATAA
GTTGATTCGAAATCTCGCTATCAACCTCTTGGCCTAAAAAAAGTAATCTTTCTCGATAAAGTCGGTTGATTAGGGTAAAATTGTATCCCTTAGGAACCGT
ACATGCGCCTTTTGATGCATACGGTTCAAAAAAAGTGTGAATCAATGTATAGATTCCAGTCCTCTTTCTTTTTTTCTAGAAAGGTTCTTTCTTACTTCTA
ACGAAAGGGCTTTTCTTCGATTTTTCAATAAAGACGGGTTTTGACTCCTTTTTTATATTTTCGATTTTCCATTATAAAATTTGAAAGGGTCATTAAACTT
ATCGAATTAACTTCTCATTGATGTATTCTTTCATCGAGATTTAATCCAAACCGCGATGGTATTTTCTTGTTCCTGAATGGGTCTGTTTCATCTTTTTAGG
TTTATGCTCTACTCCGGGTAAAGATCCGCCCGATTTGGATTTGTACATATAGGACAAATGCTCCCATTACCATTTCTTTTTGTATTTCTTTTTTTTTTTC
AATTCATTTTATACAAGTATCTCTTAGAGTTGAGATAACTTTGCTTGACAATTAGGATCTCTTTACAAAGAAAAAATATGAATAGCAATCATAGATATCT
TACCAATCCAATTGGGTTTTTTCTAAACGGAGCCTGGATACTTCATTTTTTTAGTCCAACCAAGCCAACCATAAATTATTCTAATTGAATTATTCTAATT
GATAATAGTAATATGAATCCCCTCAAAAATGGATCTAATTGCACTTCACGCTCCAAATTTTTGATGATTAAATTTATCTTTCTTGGGTGAAACGGGGGAT
ATCTCGATCGGGGGAGAGAACGGGGAAATACCATATGACCCAATATATCTGACAAGTCGCACTATACGTCAACCCAAGATGCATCTTCCTCTCCAGGACT
TCGGAAAGGAACTTTTGGAACACCAATAGGCATTAAATGAAAGAAAGAACTAAATACTATATTTCACTTTGAGGTGGAAACGTAACAATTTTTTTATTGT
CTTTATAATATTCATATTG