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Detailed information on CNT30504224


BLAST search results

BLAST vs Swiss-Prot:
sp|P27521|CA4_ARATH, E-value = 3e-07

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30144553Nicotiana attenuataMedicago truncatula8.8621.7793.7564reverse complement

Expression of CNT30504224

Peptides detected in this lncRNA

>peptide 1 (33 aa)
FPLLWSPTHNKNQHLASNQRLQGDWQCWHFSDL*

>peptide 2 (47 aa)
LFHYYGVQLTIRISIWLLISVFREIGNVGIFRIYSTTQFDWKDHLIT*

Sequence

>CNT30504224
CTTTTCCACTACTATGGAGTCCAACTCACAATAAGAATCAGCATTTGGCTTCTAATCAGCGTCTTCAGGGAGATTGGCAATGTTGGCATTTTTCGGATTT
ATAGCACAACACAATTTGACTGGAAGGACCATTTGATAACCTGATGCAGCACCTTTCAGACCCATGGCACAACAACATTGTCCAAACCTTTTGAAGCAGA
AAACCTGTTAGATACTACGCCAAAGATACTGTTATCTTTCAACCATGAGTTAGTGGTTTTGATCAAGATTTGAGCTTTGTTATAAACCTTTTGAAGCAGA
AAACCTGTTAGATACTACGCCAAAGATACTGTTATCTTTCAACCATGAGTTAGTGGTTTTGATCAAGATTTGAGCTTTGTTATAAACCAGTGACCTCTAA
TGTACAGGACGACTAGAACTGCATTCTTACTCGGATTATTCTCCTAGATCATCAAGAGAATATTTGCTTTCCAGATGGTCGAGAAGCTCACTGAAAGTTT
GTCTGGTTAAGAGAAAGCTTTTGCGGAAGATGTTAAATTTTGCATCTGAACAAAATTGCAAAAGAATGTTCCAGTATTTATTCAAGTAAAGCAAGAAGTT
ACTCTTTTGTATCATATTAATCTACGACTGTTGCTCATATTGTACATGATGCTATTGTCACATTGGCATGCATGGTGCGTGTGCTTGCTAACATAATAGC
TATGATTATTGGAAAGCAAAAC