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Detailed information on CNT3050414


BLAST search results

BLAST vs Swiss-Prot:
sp|Q39196|PIP14_ARATH, E-value = 4e-92

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30640394Cucumis sativusNymphaea colorata20.4139.481.73197forward
CNT30546615Cucumis sativusIpomoea triloba12.7545.7284.55123forward

Expression of CNT3050414

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MALITTWWYRAARAAPMKVPTISAPRPSPLV*

Sequence

>CNT3050414
AAGCATCATGGATTTAGATAAGATTTTCACTTGGACTTGAAAGGGATGGCTCTGATTACAACTTGGTGGTACAGAGCTGCAAGAGCAGCGCCGATGAAAG
TACCCACGATCTCAGCGCCAAGGCCATCCCCTTTGGTGTAACCGTCGCTCACAACGTTAGCTCCACCCCCGAGCCTTTCATAGGGCTTGGGTTGGAACCC
CTTCACCACTCCCGCGCCGCAGATGGCACCAAGGCATTGCATCACAATGTAGAAAATCGCCCTAGTCAACGACAATTTCCTCGCTAGAAACAACCCAAAA
GTGACCGCCGGGTTAATGTGGCCACCAGAGATTCCAGCAGTACAGTAAACGAGAGCAAAAATCATACCACCGAAAGCCCAAGCAATGCCCTGAATCCCGA
CGGTCCTTTCATAGGGCTTGGGTTGGAACCCCTTCACCACTCCCGCGCCGCAGATGGCACCAAGGCATTGCATCACAATGTAGAAAATCGCCCTAGTCAA
CGACAATTTCCTCGCTAGAAACAACCCAAAAGTGACCGCCGGGTTAATGTGGCCACCAGAGATTCCAGCAGTACAGTAAACGAGAGCAAAAATCATACCA
CCGAAAGCCCAAGCAATGCCCTGAATCCCGACGGTGTTACAGGTATTACCATCCGCTTCCTTGGACCGGGTGACACCCATGACGGTCAAAACGGTGATGT
AAAGGAAGAGAAAAGTAGCGAAAAACTCGGCGATTCCAGCTCTGTAAAAAGACCATGAAGTGAGCTCCTCCGGCTCGAAGAGAGGAGCCGGTGGTGGCTC
CTTGTAGTCCTTGGCATCGTCTTGGCTCTGCGCTGCCGTCCCAATGGGCTGCCTCTCGTTAAACTTATTGGCTCCCAATCGAACATCCTCCTCCTTTCCC
TCCATGATTTCTTCTTCCTTTTAGAGCTCTGTTTTTGTGTAGGTGAATACAATGGTGGAGAACGG