Detailed information on CNT3050391


BLAST search results

BLAST vs Swiss-Prot:
sp|A0A804KTT0|PIP12_MUSAM, E-value = 8e-87

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30549105Cucumis sativusIpomoea triloba22.1724.7884.4141forward
CNT30709876Cucumis sativusGlycine max13.0523.2585.5483forward
CNT30590722Cucumis sativusMusa acuminata18.8727.2785120forward
CNT30145769Cucumis sativusMedicago truncatula12.7422.2586.4281forward
CNT3082727Cucumis sativusBrassica juncea18.7125.2783.19119forward
CNT30463151Cucumis sativusSaccharum spontaneum21.5427.2481.75137forward
CNT30680173Cucumis sativusTriticum urartu13.6835.886.2187forward
CNT3024898Cucumis sativusPopulus trichocarpa26.2632.2482.63167forward
CNT30325169Cucumis sativusAsparagus officinalis22.6454.3483.33144forward
CNT30120547Cucumis sativusCitrus clementina8.8122.0587.556forward

Expression of CNT3050391

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MKVPTISAPRPSPLVYPLATMLAPPPRAS*

Sequence

>CNT3050391
ACTCACCGGAACATGTGAATCTCTGGCGCTACGTTTAGCATCAGTGGCGGAGAAGACGGTGTAAACAAGGATGAAAGTACCCACGATCTCAGCGCCAAGG
CCATCCCCTTTGGTGTATCCCTTGGCCACCATGTTAGCTCCGCCGCCAAGGGCGTCGTAGGGCTTGGGTTGGAACCCTTTCACCACGCCGGCACTGCATC
ACTATGTAGAAAACGGCCCTAGTCAAGGACAGCTTCCTCGCCAGAAACAGCCCGAAAGTCACCGCCGGGTTAATGTGGCCACCGGAAATTCCAGCAGTAC
AGTAAACCAAAGCAAAAATCATACCGCCGAAAGCCCAAGCAATCCCCTGAATTCCGACGGTCTTACACGTGTTCCCCTCAATACTCTTGGACCGGACGAC
ACCCATGACGGTCAAAACGGTGATGTAGAGGAAGAGGAAAGTAGCGAAAAACTCGGCAATTCCAGCTCTGTAAAAGGACCACGAAGTGAGCTCCTCCGGC
TCAAACAAAGGCGCCGGTGGTGGCTCCTTGTAGTCCTTAGCGTCATCTTGACTCTGTGCCGCCGTTCCAATGGGCTGTCTCTCGTTGAACTTGTTAGCTC
CAAGTCTAACATCTTCCTCCTTCCCTTCCATTCCGG