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Detailed information on CNT30503608


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30592668Nicotiana attenuataMusa acuminata25.986.3787.8205forward
CNT30574573Nicotiana attenuataVitis vinifera25.354.9898.5200forward

Expression of CNT30503608

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MCTSSNNKNGTIGSYAGSISGYRSNHLNSPFLACYSY*

>peptide 2 (32 aa)
MLGAFRGIGLTTSTPRFWHAIVIKVSRRRDSF*

>peptide 3 (73 aa)
MFALTKPAHLQKGLENLSPSYNNHFQLGAVTMSHIGTLFPVTALRKLYKNASSPTCEHQFAVQTSHFKFAFDN*

Sequence

>CNT30503608
AAGCTAGTAATACTTCCGTAGACATTGAATCCTAATGGAACTTGTTTTCCTGCTTTTCTAACTCGAGTAGCCTTTTGAAATTACGAATCCATCGCTACCC
TTTTATCATGTTTGCCTTAACAAAACCTGCACATCTCCAAAAAGGTTTAGAAAACCTATCACCGTCTTACAATAACCACTTCCAACTAGGGGCAGTAACT
ATGTCCCACATCGGAACTTTATTCCCAGTTACTGCCTTGAGAAAGCTATATAAGAACGCGTCATCTCCAACTTGTGAGCATCAATTCGCTGTGCAGACGA
GCCATTTTAAGTTTGCCTTCGACAATTAGAAAATATCAGATGGTAATTTCTTCTTCTGTATATTTCCCTTTGCTTTTATTTTTCCCTTCTTTTATTTTGT
AGGCCCAAGAAGAAAAGTTGTCGAGTGAGCGCCGTTATCGGACATTGCAGGCTGAGCATCTATTTCTCGTGTATCGTTCCACACCGAGAAGAGGGATGTG
TACCTCCAGCAACAACAAGAATGGAACCATAGGCTCCTATGCTGGGAGCATTTCGGGGTATAGGTCTAACCACCTCAACTCCCCGTTTCTGGCATGCTAT
AGTTATTAAAGTCTCTCGACGGCGGGACTCTTTTTAGTTTTAGAAGGTTTCAATAAGTGTCTTGAGACATTTGTTTTCATGTCTGGTGTTCTTTTTTTTT
TTAGTGTAGATCTACTCCGGTGCCTACTGGAGATAGACTCCTATCTATGCTAACTATCTTTGTTTGGTTTTATTTGTTATGAACCTGCA