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Detailed information on CNT3050352


BLAST search results

BLAST vs Swiss-Prot:
sp|P0DO53|PIP12_MUSAC, E-value = 2e-99

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30515171Cucumis sativusJuglans regia24.819.2882.97182forward
CNT3020709Cucumis sativusCitrullus lanatus83.2452.8189.53611forward
CNT3038976Cucumis sativusCucumis melo81.7487.8595.5600forward

Expression of CNT3050352

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MALITTWWYRAARAAPMKVPTISAPRPSPLV*

Sequence

>CNT3050352
AAGCATCATGGATTTAGATAAGATTTTCACTTGGACTTGAAAGGGATGGCTCTGATTACAACTTGGTGGTACAGAGCTGCAAGAGCAGCGCCGATGAAAG
TACCCACGATCTCAGCGCCAAGGCCATCCCCTTTGGTGTAACCGTCGCTCACAACGTTAGCTCCACCCCCGAGCCTTTCATAGGGCTTGGGTTGGAACCC
CTTCACCACTCCCGCGCCGCAGATGGCACCAAGGCATTGCATCACAATGTAGAAAATCGCCCTAGTCAACGACAATTTCCTCGCTAGAAACAACCCAAAA
GTGACCGCCGGGTTAATGTGGCCACCAGAGATTCCAGCAGTACAGTAAACGAGAGCAAAAATCATACCACCGAAAGCCCAAGCAATGCCCTGAATCCCGA
CGGTGTTACAGGTATTACCATCCGCTTCCTTGGACCGGGTGACACCCATGACGGTCAAAACGGTGATGTAAAGGAAGAGAAAAGTAGCGAAAAACTCGGC
GATTCCAGCTCTGTAAAAAGACCATGAAGTGAGCTCCTCCGGCTCGAAGAGAGGAGCCGGTGGTGGCTCCTTGTAGTCCTTGGCATCGTCTTGGCTCTGC
GCTGCCGTCCCAATGGGCTGCCTCTCGTTAAACTTATTGGCTCCCAATCGAACATCCTCCTCCTTTCCCTCCATGATTTCTTCTTCCTTTTAGAGCTCTG
TTTTTGTGTAGGTGAATACAATGGTGGAGAACGG