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Detailed information on CNT30502458


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30379393Nicotiana attenuataManihot esculenta23.3623.4387.3271forward

Expression of CNT30502458

Peptides detected in this lncRNA

>peptide 1 (76 aa)
MWWNIGHVQMAGFGWLISGLPYPSSELGHVAQTKVWAAWLLKRGGPLEAGFTEQRISPALCSGRITGWCHLSPINA*

>peptide 2 (61 aa)
PSSVMWACNPSGGINVVEYWACSDGRVWVANFWPALSKLRVGSRGPNEGMGCLAPKAGWTA*

Sequence

>CNT30502458
GCCGAGCTCAGTAATGTGGGCTTGTAACCCAAGTGGGGGCATTAATGTGGTGGAATATTGGGCATGTTCAGATGGCAGGGTTTGGGTGGCTAATTTCTGG
CCTGCCCTATCCAAGCTCAGAGTTGGGTCACGTGGCCCAAACGAAGGTATGGGCTGCTTGGCTCCTAAAGCGGGGTGGACCGCTTGAGGCTGGCTTCACA
GAGCAACGAATATCTCCCGCTCTGTGCAGTGGAAGGATAACAGGATGGTGTCATCTAAGCCCAATAAATGCCTGATGGGCTGCTCTAATTAAACCACCAC
TTTA