Detailed information on CNT3050225


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30532757Cucumis sativusEucalyptus grandis21.318.6486.5982forward
CNT30570286Cucumis sativusVitis vinifera21.0416.4692.5981forward

Expression of CNT3050225

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MKKRHNKNTNTPKHTHNEAREIEPTRVCLVVLSFIILTLS*

>peptide 2 (33 aa)
LEFGFGTNSSKIMKEENNNKIGCQFEEYNGHLN*

Sequence

>CNT3050225
CTTGGAATTTGGATTCGGTACCAATTCTTCAAAAATTATGAAAGAAGAAAATAACAATAAAATTGGATGCCAATTTGAAGAATACAATGGCCATTTGAAT
TAAAAACATAGGTTCAATAATAAAAGCCTTGGAAACAAGAAGTATCACAGCATCATTTCATATAGAGAGAAGCCACATGAAAAAAAGACATAACAAGAAC
ACCAACACTCCCAAACATACACACAATGAGGCGAGAGAGATCGAGCCAACACGTGTTTGTTTAGTAGTCCTCTCCTTCATCATCCTCACCCTCAGCTGAT
TCAGCACCCACCTCTTCATAATCCTTCTCAAGTGCAGCAAGCCATGTATTTACCGTGTCGAGGATCACACTTGACCATCATAGAC