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Detailed information on CNT30501657


BLAST search results

BLAST vs Swiss-Prot:
sp|P08834|NU1M_CITLA, E-value = 2e-88

BLAST vs NONCODE:
NONMTRT002185, E-value = 3e-65

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30523685Coffea canephoraSetaria italica4.2357.7885.58208forward
CNT30549210Coffea canephoraIpomoea triloba14.7961.5195.74727forward
CNT30700759Coffea canephoraQuercus lobata2.5648.4688.1126reverse complement
CNT30618789Coffea canephoraSesamum indicum7.3465.6496.68361forward
CNT30402103Coffea canephoraBeta vulgaris2.3823.4995.73117forward
CNT30505842Coffea canephoraNicotiana attenuata4.8469.3997.48238forward
CNT3098190Coffea canephoraSolanum tuberosum5.8455.4196.86287forward
CNT30187493Coffea canephoraSecale cereale8.9396.792.48439forward
CNT30220028Coffea canephoraHordeum vulgare8.8132.1784.53433forward
CNT30401101Coffea canephoraTriticum turgidum11.2145.2891.83551forward
CNT30592607Coffea canephoraMusa acuminata1.7720.5293.187forward
CNT30437037Coffea canephoraAegilops tauschii7.14101.4592.31351forward
CNT30664530Coffea canephoraTriticum dicoccoides7.4101.6891.76364forward
CNT30265789Coffea canephoraBrassica rapa3.4420.8691.72169forward
CNT30598800Coffea canephoraFraxinus excelsior7.5710098.92372forward
CNT30228621Coffea canephoraAnanas comosus5.1961.389.41255reverse complement
CNT30207841Coffea canephoraHelianthus annuus19.9836.6692.77982forward
CNT30685635Coffea canephoraTriticum urartu7.8339.9893.51385forward
CNT30480890Coffea canephoraArabidopsis halleri6.7710096.1333forward
CNT30354619Coffea canephoraLactuca sativa16.3548.2693.28804forward
CNT30574571Coffea canephoraVitis vinifera30.8224.6292.611515forward
CNT3056169Coffea canephoraAmborella trichopoda5.8679.1291.67288forward
CNT30149435Coffea canephoraBrachypodium distachyon2.1836.1591.59107forward
CNT30104330Coffea canephoraOryza rufipogon4.8828.0490.83240forward
CNT30495778Coffea canephoraDigitaria exilis7.4988.0485.33368forward
CNT30175599Coffea canephoraVigna angularis17.9654.7190.94883reverse complement
CNT30557320Coffea canephoraPanicum hallii7.8186.4991.93384forward
CNT30335348Coffea canephoraCynara cardunculus7.3610095.58362forward

Expression of CNT30501657

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MGNAQWLSLIGARFFKLRPTYTRCCSLSLSH*

>peptide 2 (34 aa)
MILSIGRTTVSGLNFDLSSNYVLVPKKKKESCGG*

>peptide 3 (86 aa)
MEAGGCLEVRPGFFGVVGEGFTFLTHIQSYRHGPTDLFSIGASSSATRFYLTKPVLLQGGSLLYPTPFLITRQKPPTRHSLVSNEE*

>peptide 4 (36 aa)
MVAALLICLLVTGKTSKGFIYLLFFCIPLPEVDDYS*

>peptide 5 (35 aa)
MMLGSAGSSSESEKKTETERNHFLSVTYLIRLNRI*

>peptide 6 (52 aa)
DRGALPTDQPHHHANAEVSHLRRAGYQPHRSNSIFYTDVSYSLDQVIIRKYC*

>peptide 7 (55 aa)
MAFSDRGSLLQAPPNLYKVLLAFSQPLVAYVVVGIPTCSSLPPTSKSKGHLWMLS*

>peptide 8 (49 aa)
MNRTSTSSVTPHRAYGSIPQPNLLWPRALPFYFSVSGPWEHGGAVSAFD*

>peptide 9 (47 aa)
IEEHSPRISLTIMQMQRYLICAELATNLTDPTQSFTPMYRTLSTRSS*

>peptide 10 (42 aa)
MMLTKPKPWTALCLVCSEELQLTTRLCLSHSIALALSRGFGY*

>peptide 11 (38 aa)
MVSEATEVLPSFLLHDANETETLDGTLSCVLRGTPTYN*

>peptide 12 (38 aa)
MKGVKLTPHWMIVYIHARIAYYILYKSCAIPLFACVLK*

>peptide 13 (37 aa)
MAFLGPIPSILVEAILTCSSATNLAPEIYNILDPSFY*

Sequence

>CNT30501657
AGATAGAGGAGCACTCCCCACGGATCAGCCTCACCATCATGCAAATGCAGAGGTATCTCATTTGCGCAGAGCTGGCTACCAACCTCACAGATCCAACTCA
ATCTTTTACACCGATGTATCGTACTCTCTCGACCAGGTCATCATAAGAAAATACTGCTAAATCTTTCCGAAGTTAGAGAAGGAGGGAAGGCGCGCTACAA
CTAACATAACAGCCAGCTGAAAAACGTTAGCTAGCTAGGTACGTAGTCGCTTTAGCGAAGCTTATGGGTAACGCGCAATGGCTTTCTCTGATAGGGGCTC
GCTTCTTCAAGCTCCGCCCAACCTATACAAGGTGCTGCTCGCTTTCTCTCAGCCACTAGTGGCTTATGTAGTGGTCGGCATTCCTACGTGCTCCTCTTTG
CCCCCTACTTCAAAATCCAAAGGTCACCTTTGGATGTTGTCGTGACGCTTTGGTTACAAAGGTTACCGGGGTCTAGGTTTATGGATGGATTCAGTCAGCG
AAAGTCCCTCCAACTCAATAAATATCAACAACATGTCGTGATCGGTTAGGCTTGCTTTATTTTGTCAGAAAAGAAAGTCGTTTTCGGGGGTTCATTGATT
AGTACACCTCCGGTGCTGATAAGGTCGGGACCGTGGTCGTCCGTCTCCGGTTTGCCGGCCGATAAGATCTCTTAGATTTACCAGCCAGCTGGGTTGGTTT
GGCTATTCTTTTCTATTGAAAAGGAGTCAGCTGTCTGCGCGAGTCACCTTCTTCTAGGCTCCGCTGGACGACACGGCATTTTCGTTCAAATATAGGCCGG
CCGTACTTGTGATGGTTCCCAAGGATCCAATATGACCACTTAGGTCTACGTTGCCACGATATTGTTCTATGGAAGCGGGCGGCTGTTTAGAAGTTCGGCC
CGGTTTTTTTGGTGTCGTAGGGGAGGGATTTACCTTTCTAACGCATATTCAGTCGTACCGGCATGGCCCCACTGATTTGTTTTCGATCGGAGCATCAAGC
AGCGCAACCCGGTTCTACTTGACTAAGCCCGTGCTCCTCCAAGGAGGGAGTTTGCTTTACCCAACTCCCTTTTTGATAACAAGGCAGAAACCCCCGACCC
GACACTCATTAGTTTCGAATGAAGAATGAATAGTGCCCTAGCAAGCACCTATTCCTATCAAAAAGCGAGACTTTACTAAACAAAACAAGTAAGAAAAGCC
TTTTCTATCTTATTAGTAGAGCGCTAACGCGCATCCCTTTTCTTGCTCGTTAGCGCAACGGCTTTCGCGCAGCTCAATCCGTTCCTTCTTGCCCCTGCAA
TCAAAAAACAGCGCTAACACCCTTTCTATAGTAAGGGGCCTTTTCAATAAGGCTCGCGTGGGGGCGCTCACATTTTTTGGCTTCCCTAAAATAGAATATT
TTGAAGTTCGTAAAGACCCGCCCCTTGTTTCAGTCAGAATGAGTCCCCGGGACCCCGGGACATTGGCTTCCGCCAACAGTGAACTATTAAGGATCGCATC
CCGCGCATATTCTACATTATAGCCTGCAACTGATTCAGCTTCCGCTTCTGGGAGATCAAACGGAGCTCGATTAGTTTCTGCTAGACGAGAAATAAAGAAC
ATAACCAATACAGGGAACAAGGGAATACCGGACCATATCTGCTTTTGCGCCATGACAATCTCACTCGAATTACGGGGACCTACACATATTAGTACAGTAA
TAAGAATAAGACCAATAGAAACTTCATAAGGGACCATTTGAGCTGCAGATCGTAATGCTCCTAGAAAGGCATATTTCGAATATAGAGGAGTGAAAGTTCC
CAACAATCAAGTAGTTGATCATATCCTTCTATGAACCGTACGAGCACGTCCTCTGTCACCCCCCACCGCGCTTACGGCTCTATACCCCAACCCAACTTGC
TCTGGCCCCGGGCCCTTCCTTTCTATTTCTCGGTAAGCGGACCGTGGGAGCATGGGGGGGCGGTATCTGCTTTTGACTGATAGAAAGCATCTCTGTCCCT
CCTGACCGAACTCGCTAAAAAAAGAACAATAGAAAAATTCTTGCCGGGAGAGTAGCGTCGGAGACATCTTTATCTGAGGAGGAGGCTTCGTCGCCCGGCT
CCTCATAAATGATGTTAGGATCGGCCGGCTCATCCTCGGAATCCGAAAAGAAAACAGAGACAGAACGGAATCACTTTCTTTCAGTGACATATCTAATCAG
ACTGAATAGGATTTGAAGAGCTGTCACGATCATTCACATAAATTTCAGCAGGCAGTAAGGGCGCGGAAGCTACCCTTTCTAGAATGCAAGCAAGCCAGCT
TGCTTACTCTCCTAGTAGCGTACGTTGGCGGCAAGGAAGGAGGCAAAAACAAACTAGACTATACTAAAGTAAAGAGGCATTCGGGAAGCGACTAGTCGCT
TCTGGCGAAGCTTCTAGAAGGCCGACCACTACATAGAGAGATCCATATACTAGTCATGAGCGATAGCGAAGCCTAGAGAGGCGGAAGCAGTAGCTTCTAG
GATGAAGCCGAGCCGATACGATAGGCGGGCGAAGGGCTAAGCCACTAATGTCGTGGCGAAGGAGGCCTACTATACGTATACTGGATTAGTAACCGGTGAA
ATACCAAAAAAACGAAAAAAAATTGGAGTGAACTATTGAAGCTATCAGTGTGATTGATCAGACAAGTATCAAGGGCTTTCGGTAGACTTCTTTCATTTCC
GAATTAGCTTGCGACAAGTCCTAGCATTAGTATGAGTTCGTTGACCGCGTACGGGCGATCCGTATTGATGACGAATTCCACGATAACAAGAAATAGAAAT
TAATCGTTCGATGTCTGCTCGTTCTCCCCTCTTCAATTCCCAATGAACAACATGATCTTGACCTATCATTTGTGAAATTTGGTCGATCTGATACTTAGTT
AATTCTTTTATCTTTATGTTCCCACTGATACCTAATCGATAACGAACCTGAATGGCTTTTTTGGGTCCAATTCCATCAATTTTGGTTGAGGCAATTCTTA
CTTGTTCATCGGCAACTAATCTAGCTCCTGAAATATATAACATTCTTGATCCTTCCTTTTACTAGTCTTCTCGGCTGGAATCATAAATGGGTTGTCTCCT
CTCTGATGATCCTTTCTATAGGTAGAACTACTGTGAGCGGTCTAAACTTCGATCTTTCTTCCAATTATGTTCTCGTACCGAAAAAAAAGAAAGAGTCTTG
TGGAGGATAATTTCACACTTATCTCACTAAATTAGCGAGAAAGTGCTCCGCGATGGGTCGCGGTCTCCATTTTCGCCTTTAAGATAGCGCAGAAGGTATT
TTAGGGCCGGCCACTATGTTCGCATCCCCCGACTCATAATCGAAGTGGTCTCGTGCGATCTCATGCGCGGCCATCATTAAGTCGGCTGGGCTGCCTGCGG
TTACGGAATCGCCCGCAGAAGCCCCCTTGACTCTCTCTCTATAAAAAAAAAGCGTTCTGCGTCATCCAGCGGCGCTGGCGCAGGTTTTTATTCCTTCTGC
CCAGCTCCCCGAAAACACTTTATGGCCGCTTATGGTATCGGAGGCGACTGAAGTACTACCTTCTTTTCTGTTGCATGATGCTAACGAAACCGAAACCCTG
GACGGCACTCTGTCTTGTGTGCTCAGAGGAACTCCAACTTACAACTAGACTTTGTCTTTCACACTCCATAGCTCTAGCTCTAAGCCGAGGATTTGGTTAT
TAACCCTCCAAGGTGCCCGTGGACGGGCGAGCACTAAATGAAAGGGGTGAAACTGACTCCACATTGGATGATCGTGTACATTCACGCGCGAATTGCGTAT
TATATATTATATAAGTCCTGTGCGATCCCGCTGTTCGCCTGCGTATTGAAATGATAACCTACAAAGCTTGGATTCCAGTGCTGTTTGATAAAGAAAAGAG
CGGTTAACGGAAGACTTCTCAGAAGTAAAGAGCCCTTATTATTCGGATTTGAACTTAAGCCTATTTTCTAAAGGGCCTTACACTGAACACAAAGAAAATA
TAGACGAATAAGCAAGGAAAAGAAAAGATTCGACTTCGGATTCTGAAAAGAATGACTAGCGACCCTTCTTCCTAATTCTATTCAATAGGAGCAGAGTCAT
GAACAAGAATAGCCACCTCCTTATTTTTTTACGCAATTAATTGACGACTTTCTTCTCCACCCGTAGGAGCCGACCTCGCCTAGTATAGCTGCGCTTTCTT
TTCTTCTTCTTGGTCTAGTCTATCTACCCGTCTCTAAGCCCCTCACCTTCCCTTATTGGAGTACAGGTCAGAGGAAGAGATTTAAAGTGAGAGGCAATAC
TGAACCGCAGCCACATCGAGTGACTTCCCCTCAAAGCCTTCTTCCGAACTTGCCAACAAAAGCAGATCGGTCTCTATCAAAAAATCAAAGGGGTCAAAAT
CACCAACTTTCATAGTTCCAACGACTGGGTATGGATCCGCGCGAGATGATAGCTTTCTCGGGTTTTTGATTTGAATGGTTGCTGCTTTGTTGATTTGCCT
CTTGGTAACGGGAAAAACTAGCAAAGGTTTTATTTATTTACTTTTCTTTTGTATACCTTTGCCGGAAGTCGATGACTATTCATAGCTATTACCTTGACAC
CAAAGAAGAGTTCGACCCAATGCTTTATTTCTGTCCTAGTTGATCCCGATTCGACATTAAAAGTATATTGATTTTTCCCCAATAACCGAATACTTTTGTC
TGTAAATACTGCATATTTGATTCCATCCATAAATCTATTTTCTTCCCTATGAGTTCTAGTCTCAATAAGAATGCTAGTTCTTACTGTTCATATATTATGA
TATGAATATACCACACCAATTCGTTATGTATGGATGATGAGATTCCATTGATACAGAGCCAATTCCAATAGACTTATTGGAGGGTCCCATTGGCGTGCAT
CCAGTAGGAATTGAAC