Detailed information on CNT30501297


BLAST search results

BLAST vs Swiss-Prot:
sp|P93604|LRK10_WHEAT, E-value = 1e-52

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30689963Coffea canephoraOryza sativa28.675.6984.87119forward
CNT30315005Coffea canephoraCorylus avellana30.367.0582.54126forward
CNT30701990Coffea canephoraQuercus lobata31.5722.4386.26131forward
CNT3085653Coffea canephoraVigna radiata23.134.7782.2996forward
CNT30171019Coffea canephoraTrifolium pratense27.2333.2482.3113forward
CNT30573477Coffea canephoraVitis vinifera29.647.8883.74123forward
CNT30109318Coffea canephoraOryza longistaminata17.8328.5789.1974forward
CNT3024212Coffea canephoraPopulus trichocarpa31.8120.8281.06132forward
CNT30594890Coffea canephoraEragrostis curvula26.279.9684.4109forward

Expression of CNT30501297

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MENHSDSLRKLTYPESHLACNHTLEHVLRQ*

>peptide 2 (43 aa)
MRLNIKMQNLHITPLMQVFNATSNPLCNLANLLPNQWRTILTV*

Sequence

>CNT30501297
ACCTAAAGTTCCTCTCGCAGCAGTAAGAGTTGCAATACTCTTTTGCATCGGGTAAAGTTTTGCAAGTCCAAAGTCTGAAACTTTTGGAACAAAGTTCTCA
TCAAGTAAGATGTTATGCGGCTTAATATCAAAATGCAGAATTTGCATATCACACCCCTGATGCAAGTATTCAATGCCACGAGCAACCCCCTTTGCAATCT
CGCAAACTTGCTTCCAAATCAATGGAGAACCATTCTGACAGTTTGAGAAAATTAACTTATCCAGAGAGCCATTTGGCATGTAATCATACACTAGAGCATG
TTTTGAGGCAGTAACACAAAATCCCACTAACCGAATCACGTTCACATGGTGTATTCTTCCAATAGTTGCAACTTCATTGATGAACTCTTGTCCATTAGCT
TTTGATTTGTTCAGC