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Detailed information on CNT30500634


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30639077Coffea canephoraCapsicum annuum83.9957.1595.18955forward
CNT30212627Coffea canephoraHelianthus annuus80.0489.3994.95910forward
CNT30719706Coffea canephoraMalus domestica golden85.2283.6194.12969forward
CNT30336076Coffea canephoraCynara cardunculus82.6733.4692.66940forward

Expression of CNT30500634

Peptides detected in this lncRNA

>peptide 1 (34 aa)
STPAKPQPRERVWQNHRGKKTLLSLTLIRLCEMT*

>peptide 2 (31 aa)
VYTSETTAKGTGLAESPGKEDPVELDSNPTL*

Sequence

>CNT30500634
TGTCTACACCAGCGAAACCACAGCCAAGGGAACGGGTTTGGCAGAATCACCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAATCCGACTTTGTGAAAT
GACTTGAGAGGTGTAGGAAAAGTGGGAGCCGAAAGGCGAAAGTGAAATACCATTACTTTTAACGTTATTTTATTTATTCCGTGAATCGGAGGCGGGGCTC
TGCCCCCTCTTTTGGACCCAAGGCCCGCTTCGACGGTCCGATCCGGGCGGAAGACATTGTCAGGTGGGGAGTTTGGCTGGGGCGGCACATCTGTTAAAAG
ATAACGCAGGTGTCCTAAGATGAGCTCAACGAGAACAGAAATCTCGTGTGGAATAGAAGGGTAAAAGCTCGTTTGATTCTGATTTCCAGTACGAATACGA
ACTGTGAAAGCGTGGCCTAACGATCCTTTAGACCTTCGGAATTTGAAGCTAGAGGTGTTAGAAAAGTTACCACAGGGATAACTGGCTTGTGGCAGCCAAA
CGTTCATAGCGACGTTGCTTTTTGATCCTTCGATGTCGGCTCTTCCTATCATTGTGAAGCAGAATTCACCAAGTGTTGGATTGTTCACCCACCAATAGGG
AACGTGAGCTGGGTTTAGACCGTCGTGAGACAGGTTAGTTTTACCCTACTGATGACAGTGTCGCAATAGTAATTCAACCTAGTACGAGAGGAACCGTTGA
TTCGCACAATTGGTCATCGCGCTTGGTTGAAAAGCCAGTGGCGCGAAGCTACCGTGCGCTGGATTATGACTGAACGCCTCTAAATCAGAATCCGAGCTAG
AAGCGATGCATATGCCCGTCGCCCGTTTGCCGACCCGCAGTAGGGGCCTCTGGCCCCCAAGGGCACGTGTCGTGGGCTAAGTCCTCGCGGCGGAAGAGCC
GCGTTGGCTGCCTTGAAGTACAATTCCCATCGAGCGACGGGTAGAATCCTTTGCAGACGACTTAAATACGCGACGGGCCATGCATGTGTAAGTATGAACT
AATTCAGACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTATCTGCTACTCGGATAACCGTAGTAATTCTAGAGCTAATACG
TGCAACAAACCCCGACTTCTGGAAGGGATGCATTTAT