Detailed information on CNT30500348


BLAST search results

BLAST vs Swiss-Prot:
sp|P69325|UBIQP_SOYBN, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 6e-135

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30274489Coffea canephoraChenopodium quinoa57.4870.6784.39865forward
CNT3019912Coffea canephoraCitrullus lanatus55.5550.0382.78836forward
CNT30629116Coffea canephoraVigna unguiculata56.6184.7882.04852forward
CNT30490421Coffea canephoraOlea europaea44.5841.4583.16671forward
CNT30637458Coffea canephoraCapsicum annuum56.7419.4583.37854forward
CNT3096972Coffea canephoraSolanum tuberosum54.6267.8884.31822forward
CNT30124791Coffea canephoraPhyscomitrium patens41.5955.2583.87626forward
CNT30145547Coffea canephoraMedicago truncatula55.3541.8683.55833forward
CNT30609009Coffea canephoraGossypium raimondii55.7587.9583.31839forward
CNT30623044Coffea canephoraDaucus carota56.4143.0584.69849forward
CNT30418079Coffea canephoraPapaver somniferum56.4165.6182.69849forward
CNT30572855Coffea canephoraVitis vinifera42.3967.9484.01638forward
CNT30642231Coffea canephoraCannabis sativa55.5578.8782.18836forward
CNT3056329Coffea canephoraAmborella trichopoda54.9571.681.74827forward
CNT30321313Coffea canephoraAsparagus officinalis55.1563.3183.98830forward
CNT30120580Coffea canephoraCitrus clementina55.7576.982.12839forward
CNT30111662Coffea canephoraFicus carica55.7562.0683.08839forward
CNT3050777Coffea canephoraCucumis sativus54.9585.1783.8827forward

Expression of CNT30500348

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MVSELSTSRVIVFPVRVLTKICMPPLRRSTRWRVDSF*

>peptide 2 (32 aa)
MSLCWSGGIPSLSWILALTLSIVSELSPGSWL*

>peptide 3 (53 aa)
MKFIQNTGNTSNFPITSCLTNKHRHQSQKTRPQTLLKDPYKMALFDGPTTHAR*

>peptide 4 (43 aa)
MVSELSTSRVMVLPVRVLTKICICSDGRSEFRSQNPINRKEEQS

>peptide 5 (31 aa)
MVSELSTSRVIVFPVNVLTKICMPPLNLSTK*

Sequence

>CNT30500348
CATATATAAAAGGACATAGTAAAAGTTCCATTCTCAACATGATACTCCAAGAACGAAAATGAAATTTATTCAAAATACAGGTAACACATCCAATTTTCCC
ATAACAAGCTGTTTAACAAACAAACACCGCCACCAATCCCAGAAAACACGGCCACAAACACTATTAAAAGATCCATATAAAATGGCTTTATTTGACGGTC
CGACCACCCATGCACGATAACACCAAGACAGCTTCAACAGAGTACAGCATTTAGAAGCCACCGCGCAAACGGAGGACAAGGTGGAGGGTGGACTCCTTCT
GGATGTTATAGTCAGCCAAGGTCCTGCCATCTTCCAATTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGTGGGATCCCCTCCTTATCCTGAATCTT
AGCCTTCACATTGTCAATTGTGTCCGAACTCTCCACCTCTAGGGTGATGGTCTTTCCGGTCAAAGTCTTCACAAAGATCTGCATTCCTCCTCTCAACCTA
AGCACCAAGTGAAGGGTTGACTCCTTCTGAATGTTATAATCCGCCAGAGTGCGTCCATCCTCAAGCTGCTTACCAGCAAAGATCAACCTTTGCTGGTCTG
GTGGGATTCCCTCCTTGTCCTGAATTTTTGCCTTGACATTGTCTATGGTATCAGAGCTCTCCACCTCAAGGGTGATTGTCTTCCCAGTCAATGTCTTGAC
GAAAATCTGCATGCCGCCCCTCAACCTCAGCACCAAGTGAAGGGTGGACTCTTTCTGAATGTTGTAATCAGCAAGAGTCCTTCCGTCCTCAAGCTGCTTG
CCGGCGAAAATCAACCTCTGCTGGTCTGGGGGAATACCCTCCTTGTCTTGAATCTTAGCCTTGACATTATCAATGGTGTCAGAGCTTTCCACTTCGAGGG
TGATAGTCTTCCCGGTGAGGGTCTTGACGAAAATTTGCATGCCTCCCCTAAGACGAAGCACCAGGTGGAGGGTTGATTCCTTCTGAATGTTGTAGTCGGC
AAGGGTTCGTCCATCCTCAAGTTGCTTTCCAGCAAAGATGAGCCTTTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTGGCTTTGACGTTGTCA
ATAGTGTCGGAACTTTCTCCTGGATCTTGGCTTTGACGTTGTCAATAGTGTCGGAACTTTCAACCTCGAGGGTAATAGTCTTTCCAGTAAGGGTCTTCAC
GAAGATCTGCATCCCACCCCTCAAACGGAGAACCAAGTGGAGGGTGGACTCCTTTTGGATATTGTAGTCAGCGAGGGTGCGGCCATCCTCTAGTTGCTTT
CCGGCAAAGATCAACCTTTGCTGGTCCGGGGGAATTCCTTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAACTCTCGACTTCGAGAG
TGATGGTCTTGCCGGTAAGAGTTTTGACAAAGATCTGCATCTGCTCAGATGGAAGATCCGAATTCAGAAGTCAGAATCCAATTAATCGAAAAGAAGAACA
ATCAC