Detailed information on CNT30500291


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30283133Coffea canephoraChenopodium quinoa51.6685.4989.59701forward

Expression of CNT30500291

Peptides detected in this lncRNA

>peptide 1 (92 aa)
MCASQRASKPVRRKPWRRRRLDRGGAVRAIGVLRHLRAPDAGLRAPHSARLETRTKESDMCASQRASKPVRRKEADWRDPPCGVHRRPTLIF*

>peptide 2 (30 aa)
MLACGHPIRPVLKHGPRSLTCVRVNGRVNP*

>peptide 3 (91 aa)
MRPGRMWNGASRSADRLGAWTSADWGGGQSPGCRYACGDAVASIVAGQCAPSACFGICALPMLACGHPIRPVLKHGPRSLTCVRVNGRVNP*

>peptide 4 (53 aa)
AFRPRARLPGRHASCRHPPPAGVGGDWPPVPPGAAGLNASPRRGTSPLSLSCR*

>peptide 5 (51 aa)
MSPPPSRGGRRRLASRAPGRGRPKRESSARDVTTILVVPLDHPPQSGLRRP*

>peptide 6 (42 aa)
MPERSEARGNSGGGPQRVFCFRLSSGLWDYFTLGLASVFNENS

>peptide 7 (40 aa)
MQPQSGGKFCPRLNTGERPIANKYREEKMKRTLKRESKSA*

>peptide 8 (38 aa)
MPVETPSPRSWRGSARHRRASASARSRCWPAGTPFGPS*

>peptide 9 (37 aa)
MGAGDAPRSNVERRQPVRRSARGVDQRRLGRRPKPGL*

>peptide 10 (36 aa)
PLGRGHVCLGVTHHVATPLPRGSAETGLPCPRARPA*

Sequence

>CNT30500291
GCCTTTAGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCATGTCGCCACCCCCCTCCCGCGGGGGTCGGCGGAGACTGGCCTCCCGTGCCCCCGGGCG
CGGCCGGCCTAAACGCGAGTCCTCGGCGAGGGACGTCACCACTATCCTTGTCGTGCCGTTAGACCACCCGCCGCAGTCGGGGCTCCGACGACCCTGAAGA
GAATCGCTCTCATCTCGACGGCGACCCCAGGTCAGGCGGGATTACCCGCTGAGTTTAAGCATATCAATAAGCGGAGGAAAAGAAACTAACAAGGATTCCC
CTAGTAACGGCGAGCGAACCGGGAACAGCCCAAGCTTAGAATCGGGCGGCTCCGCCGTCCGAATTGTAGCCTGGAGAAGCGTCCTCAGCGGCGCACCGGG
CCCAAGTCCCCTGGAATGGGGCACCGGAGAGGGTGACAGTCCCGTCGTGCCTGGACCCTGTCGCACCACGAGGCGCTGTCGGCGAGTCGGGTTGTTTGGG
AATGCAGCCCCAATCGGGCGGTAAATTCTGTCCAAGGCTAAATACCGGCGAGAGACCGATAGCAAACAAGTACCGCGAGGAAAAGATGAAAAGGACTTTG
AAAAGAGAGTCAAAGAGTGCTTGAAATTGTCGGAAGGGAAGCGAATGGGGGCCGGCGATGCGCCCCGGTCGAATGTGGAACGGCGCCAGCCGGTCCGCCG
ATCGGCTCGGGGCGTGGACCAGCGCAGATTGGGGCGGCGGCCAAAGCCCGGGCTGTAGATATGCCTGTGGAGACGCCGTCGCCTCGATCGTGGCGGGGCA
GTGCGCGCCATCGGCGTGCTTCGGCATCTGCGCGCTCCCGATGCTGGCCTGCGGGCACCCCATTCGGCCCGTCTTGAAACACGGACCAAGGAGTCTGACA
TGTGTGCGAGTCAACGGGCGAGTAAACCCGTAAGGCGCAAGCCGTGGAGACGCCGTCGTCTCGATCGTGGCGGGGCAGTGCGCGCCATCGGCGTGCTTCG
GCATCTGCGCGCTCCCGATGCTGGCCTGCGGGCACCCCATTCGGCCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAACGGGCGAGT
AAACCCGTAAGGCGCAAGGAAGCTGATTGGCGGGATCCCCCCTGCGGGGTGCACCGCCGACCGACCTTGATCTTCTGAGAAGGGTTCGAGTGTAAGCATA
CCTGTCGGGACCCGAAAGATAGTGAACTATGCCTGAGCGGAGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGTGTTTTTTGTTTCAGGCTTTCG
TCTGGGCTCTGGGATTATTTTACACTTGGGCTTGCATCTGTTTTTAATGAAAATAGC