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Detailed information on CNT30499584


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30379331Coffea canephoraManihot esculenta21.0521.1289.0664reverse complement
CNT3092489Coffea canephoraSolanum tuberosum2525.5984.2176reverse complement
CNT30620685Coffea canephoraCajanus cajan21.386.7987.6965reverse complement
CNT3056201Coffea canephoraAmborella trichopoda25.9925.7386.0879reverse complement
CNT30174902Coffea canephoraVigna angularis27.327.2186.7583reverse complement

Expression of CNT30499584

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MGRPVVSFTRPTIWNNPTFQHFNTPTRVTSSRDQ

>peptide 2 (71 aa)
ISESVGPIRMTHLAIVDSCSSSLLSFHCEERDVLVALSSQPHAVSSTLGAKWSRPPLKPHGSALRLEWAGR*

Sequence

>CNT30499584
AATTTCAGAAAGTGTTGGTCCAATTAGGATGACCCATTTGGCAATAGTGGACTCGTGCAGCTCTAGCCTGTTATCCTTCCACTGCGAGGAGCGGGATGTT
CTCGTTGCTCTGTCAAGCCAGCCTCACGCAGTATCCTCCACTTTAGGAGCCAAGTGGTCCAGGCCTCCGCTCAAACCACATGGCTCAGCCCTCCGCTTAG
AATGGGCAGGCCGGTAGTTAGCTTCACAAGGCCTACCATCTGGAACAATCCAACGTTCCAACACTTTAATACCCCCACTCGGGTCACAAGCTCGCGCGAC
CAAG