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Detailed information on CNT30499448


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG86|RS271_HORVU, E-value = 2e-90

BLAST vs NONCODE:
NONMEST001181, E-value = 6e-44

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30316655Digitaria exilisCorylus avellana29.9371.7593.36226forward
CNT30628786Digitaria exilisVigna unguiculata29.845.9292.89225forward
CNT30178120Digitaria exilisSecale cereale30.625.8494.81231forward
CNT30283510Digitaria exilisTriticum aestivum30.632.1396.97231forward
CNT30220676Digitaria exilisHordeum vulgare30.641.0396.54231forward
CNT30435195Digitaria exilisAegilops tauschii30.639.996.1231forward
CNT30241998Digitaria exilisAvena sativa30.629.1795.67231forward
CNT30655772Digitaria exilisTriticum dicoccoides30.628.3196.97231forward
CNT30130551Digitaria exilisLolium perenne30.633.9296.54231forward
CNT3067544Digitaria exilisLeersia perrieri30.614.0495.67231forward
CNT30720110Digitaria exilisTriticum spelta30.636.5596.54231forward
CNT30341903Digitaria exilisEragrostis tef30.627.3796.97231forward
CNT30368046Digitaria exilisSorghum bicolor30.637.8798.27231forward
CNT30369422Digitaria exilisOryza glumipatula30.617.6695.24231forward
CNT30576569Digitaria exilisOryza barthii30.619.0995.67231forward
CNT30116662Digitaria exilisOryza nivara30.610.2395.67231forward
CNT30594254Digitaria exilisEragrostis curvula30.627.8696.97231forward

Expression of CNT30499448

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MSRCWSGGMPSLSWILAFTLSMVSEDSTSNVMVFPVRVFTKICI

>peptide 2 (94 aa)
MLVLDLLGLGVRLLLALLGATAEAEHQVEGGLLLDVVVGKGAAVLELLAGKDEPLLVRRDALLVLDLGLHVVDGVRGLHLQRDGLPRQGLHEDLH

Sequence

>CNT30499448
CCAGATGTAAGACAGGCCATTCTAATTCTTATCAGTAGCCATCATATTGAATACAATGAAAGATGGCGAAATGGGCAAAGGATATAATCATCAAGCAAGA
TAGAAAATAGAACCAAAATTAAACTCGCATCACATCATCTCAGTAACAGGCATTCCAAGAAGAGAGATACTGCAACTCCATTTAAGTTTCAACCTCAGAC
AGATCTAAATGATATTCAATTCGAGTAACCAACAGCTCGATTCATGATAGGTAGGCGGGTAAAGCTAAGCAAAGCGATGCAACCGATTACGCCTTCTGGT
TGTAGACGTAGGTGAGGCCGCACTTGCCGCAGTAGTGGCGGTCGAAGTGGTTGGCCATGAAGGTGCCCGCGCCGCAGTCGGCGTTGGGGCACTCCTTGCG
GAGGCGGGTGACCTTGCCGGTGGCGTCGTCGACCTTGTAGAACTGCAGCACGGCGAGCTTCACCTTCTTATGCTTGTGCTTGATCTTCTTGGGCTTGGTG
TACGTCTTCTTCTTGCGCTTCTTGGCGCCACCGCGGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGGCCGT
CCTCGAGCTGCTTGCCGGCAAAGATGAGCCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGA
CTCCACCTCCAACGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCATC