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Detailed information on CNT30499372


BLAST search results

BLAST vs Swiss-Prot:
sp|Q3BAI2|YCX91_PHAAO, E-value = 5e-14

BLAST vs NONCODE:
NONSLYT003133, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696398Digitaria exilisOryza sativa14.1510098.96481forward
CNT30671914Digitaria exilisSetaria viridis43.7889.4899.41488forward
CNT30524649Digitaria exilisSetaria italica62.0563.9999.862109forward
CNT30641383Digitaria exilisNymphaea colorata39.142.5494.511329forward
CNT30550219Digitaria exilisIpomoea triloba38.8630.4298.111321forward
CNT30702366Digitaria exilisQuercus lobata26.7791.3798.46910reverse complement
CNT30378673Digitaria exilisArabidopsis thaliana21.1857.7496.67720reverse complement
CNT30619000Digitaria exilisSesamum indicum29.2732.5793.67995forward
CNT30283003Digitaria exilisChenopodium quinoa26.4594.1497.66899reverse complement
CNT30730481Digitaria exilisCorchorus capsularis34.8696.3493.671185reverse complement
CNT30632346Digitaria exilisVigna unguiculata38.0446.2397.831293forward
CNT30490123Digitaria exilisOlea europaea15.4830.2197.15526forward
CNT30505560Digitaria exilisNicotiana attenuata38.8959.7997.51322reverse complement
CNT30157603Digitaria exilisPistacia vera21.9278.0990.6745forward
CNT30185187Digitaria exilisSecale cereale54.6952.5698.551859forward
CNT30294268Digitaria exilisTriticum aestivum54.6961.3998.281859forward
CNT30223648Digitaria exilisHordeum vulgare54.6978.2795.051859forward
CNT30387090Digitaria exilisTriticum turgidum54.6966.0698.61859forward
CNT30569655Digitaria exilisActinidia chinensis38.7536.9897.191317forward
CNT30543268Digitaria exilisBrassica napus34.9551.7695.451188forward
CNT30555751Digitaria exilisOryza glaberrima12.861.0197.24435reverse complement
CNT30147396Digitaria exilisMedicago truncatula38.0143.4397.521292forward
CNT30435868Digitaria exilisAegilops tauschii41.0110099.281394forward
CNT30242786Digitaria exilisAvena sativa25.51100.1299.54867forward
CNT30670388Digitaria exilisTriticum dicoccoides54.6966.398.171859forward
CNT30140120Digitaria exilisLolium perenne54.655.8999.31856forward
CNT3017956Digitaria exilisZea mays55.4353.4297.611884forward
CNT30605068Digitaria exilisGossypium raimondii34.0775.7997.061158reverse complement
CNT30216578Digitaria exilisKalanchoe fedtschenkoi37.8938.6797.981288forward
CNT30655407Digitaria exilisRosa chinensis38.6339.2897.641313forward
CNT30207637Digitaria exilisHelianthus annuus31.5454.8193.561072forward
CNT30628241Digitaria exilisDaucus carota35.8645.1598.931219reverse complement
CNT30689137Digitaria exilisTriticum urartu30.4586.0398.651035forward
CNT30721631Digitaria exilisTriticum spelta54.6953.5398.491859forward
CNT30346087Digitaria exilisEragrostis tef24.9582.01100848forward
CNT30595568Digitaria exilisOryza meridionalis11.398.9799.22384reverse complement
CNT30359771Digitaria exilisLactuca sativa28.392.0697.19962forward
CNT30429739Digitaria exilisPapaver somniferum35.637.6194.631210forward
CNT30571858Digitaria exilisVitis vinifera39.7238.95981350reverse complement
CNT3056076Digitaria exilisAmborella trichopoda34.545193.021174forward
CNT30108930Digitaria exilisOryza longistaminata45.7266.411001554forward
CNT3038324Digitaria exilisCucumis melo36.0765.0197.881226reverse complement
CNT30103741Digitaria exilisOryza rufipogon15.398.8695.38520reverse complement
CNT30603680Digitaria exilisOryza punctata100.1286.2299.353403forward
CNT30557400Digitaria exilisPanicum hallii19.2747.7498.17655forward

Expression of CNT30499372

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MSNEKSCEKHDRLPVEGFLRSVNLRRVNRSLRNPRKGCRPMGTRK*

>peptide 2 (45 aa)
MMEKPASSKRRLCCRSAPYGVVQSQQPFWGASIGNTGLMTGWGAQ*

>peptide 3 (48 aa)
RALRRKDAFRGERPWGERASVIHGSPIGKPYPSSVASLRSLDFSNLAN*

>peptide 4 (50 aa)
MTTRRWAWKQPSFEESVIAHWSSSMAPKMSQGSSDSPKRRDLESCFFKCQ*

>peptide 5 (33 aa)
MMSMARGRALNGLGWPPFRFTNPRETPNTGRHP*

>peptide 6 (35 aa)
GIEKEGRFQRRKAMGRESVCDPWISDRETVSKLRG*

>peptide 7 (32 aa)
MKVVRELGLERRETVRFLSTVGVKGRTARSQP*

>peptide 8 (89 aa)
MIGPRVFKTPLPLALLSLIFTVESSKPSTNSEGLGWPGRPTLLALPKAKLSSLATSKRRAKTFRFEARDERESRCASVHAHTFSCSVAR*

>peptide 9 (97 aa)
MSAKAVALPYTRIRFLAPSRVSTITRSRFLAGADTDRLSKKTLKWANTRPSGRTCRLRLRAPADTFRSTFTCEPKSSCRTPSFLISVLAFFIFRRGL*

Sequence

>CNT30499372
CGGGCATTGAGAAGGAAGGACGCTTTCAGAGGCGAAAGGCCATGGGGAGAGAGAGCGTCTGTGATCCATGGATCTCCGATCGGGAAACCGTATCCAAGCT
CCGTGGCTAGTCTGCGCTCTTTGGACTTTTCAAACTTAGCGAACTGAAACATCTGAGTAGCTAAAGGAAGGAAAATCAACCGAGACCCCGTTAGTAGCGG
CGAGCGAGAGCGGAACAAGGGTTTTCATCAAAAGAAATCCGAAGCGGTTTCATTCGATTTGTTGTGGATTGGATGATGGAAAAACCAGCAAGCAGCAAGC
GTAGGCTGTGTTGCCGTAGCGCGCCCTACGGAGTTGTACAAAGTCAGCAACCGTTTTGGGGCGCAAGCATAGGCAACACAGGACTGATGACGGGGTGGGG
CGCGCAGTGAACTGGTTTTCTAAAAAGATTGGAAGATCCGGCCAAAGAAGGTGATAGCCCTGTTCATTCGTTCCCATGGTTCGATCCTTCCCAGTAAAAC
GCGGCGTGTTCGAATGATGATCGCTTTTACGCGAGAAAGGGGGACCACCCTCTAAGCCTAAGTATTCCTCAATGACCGATAGCGTACAAGTACCGTGAGG
GAAAGGTGAAAAGAACCCCAATCGGGGAGTGCAATAGAGAACCTGAGATCCGATGCGAACAATCAGTCGAAGGAGCGGAGCGCGGGCGCACTCACTCTAA
CGGCGTACCTTTCGCATGATGGGTCAGCGAGGAAATGGGAACAGCGGCTTAAGCCATTAGGTGTAGGCGCTTTCCAGAGGTGGAAGATTTACGTTCTTCC
TATTTGACCCGAAACCGATCGATCTAGCCATGAGCAGGTTGAAGAGAGCTCTAACAGGCCTTGGAGGACCGAACCCACGTATGTGGCAAAATACGGGGAT
GACTTGTGGCTAGGGGTGAAAGGCCAACCAAGATCGGATATAGCTGGTTTTCCGCGAAATCTATTTCAGTAGAGCGTATGATGTCGATGGCCCGAGGTAG
AGCACTCAATGGGCTAGGGTGGCCCCCATTTCGCTTTACCAACCCCAGGGAAACTCCGAATACAGGCCGTCATCCTTAGTACAGACAGACTGATTGGGTG
CTAAGATCCAAAGTCGAGAGGGAAACAGCCCAGATCGTACGCTAAGGTCCCTAAGCAATCACTTAGTGGAAAAGGAAGTGATCGAGCGATGACAACCAGG
AGGTGGGCTTGGAAGCAGCCATCCTTTGAAGAAAGCGTAATAGCTCACTGGTCTAGCTCCATGGCACCGAAAATGTCTCAGGGCTCAAGTGATTCACCGA
AGCGACGAGACCTTGAAAGCTGCTTTTTCAAGTGTCAGTAGCGGGACGTTCTGTCAATCGGGGAAGGTTTTTGGTGACAAGACCTGGAGATATCAGAAGT
GAGAATGCTGACATGAGTAACGAGAAATCCTGTGAAAAACACGATCGCCTGCCAGTGGAAGGCTTTCTGCGTTCAGTCAATCTACGCAGAGTGAATCGGT
CCCTAAGGAACCCCCGAAAGGGCTGCCGTCCGATGGGTACACGAAAGTGACGAAGTTGCTTTGACTACTGAACCATGCCTGGATCGTCGGAGCGAATTGG
ATGATCGGGCCGAGGGTTTTTAAAACCCCTCTTCCCCTCGCTCTCCTTTCCTTAATATTCACCGTCGAGTCATCAAAGCCGTCAACTAATTCAGAGGGGC
TCGGCTGGCCCGGTCGCCCTACGCTACTGGCGCTTCCAAAGGCGAAGCTCTCGTCTTTGGCGACCAGCAAACGGAGGGCTAAAACCTTTCGTTTTGAAGC
AAGGGATGAGCGCGAAAGCCGTTGCGCTTCCGTACACGCGCATACGTTTTCTTGCTCCGTCGCGCGTTAGTACAATAACGCGCAGCCGTTTTCTTGCTGG
GGCGGACACGGATCGACTCTCTAAGAAGACTCTGAAGTGGGCGAACACTCGGCCCAGCGGGCGAACATGCCGGCTCCGGCTCCGCGCACCTGCTGACACC
TTTCGAAGCACTTTCACGTGTGAACCGAAGTCGTCTTGCCGAACTCCTTCCTTTCTCATTTCAGTCCTCGCCTTTTTCATCTTCCGTAGGGGCCTTTAGT
CTTTTGATTAGAGTAGAGGTCGCGAGAGAGCAGAGCGTACCGCCCTGCCATAGTCGCGAGGATCTTAATAGTCGGTCGCGACTGTTGTCATAGTCAACGA
CGGTTGAAACTTCCAGGAAAAAACTTCGAATTGGGAGGGCGATCCTCCCGGTGAACTGACCGTACCCCAAACCGACACAGGTGAACAAGTAGAGTATACT
AGGGCGCGTCGAGAGAACCATGTCGAAGGAACTCGGCAAAATGACCCCGTAACTTCGGGAGAAGGGGTGCTCTCCTATCTTTTGATTAGGAAAGCGGCAC
ATACCAGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGATGTATAGAGTCTGACACCTGCCCGGTGCTGGAAGGTCGGAA
GGAGAAGTGTGATAAGCTTTGAATGGAAGCCCCGGTAAACGGCGGCAGTAACTCTAACTGTCCTAAGGTAGCGAAATTCCTTGTCGCATAAGTAGCGACC
TGCACGAATGGTGTAACGACTGCCCCGCTGTCTCCGACATGGACCCGGTGAAATTGAATTCTCCGTGAAGATGCGGAGTACCAACGGCTAGACGGTAAGA
CCCCGTGCACCTTGACTATAGCTTCGCAGTGACAACCTTGATCGAATGTGTAGGATAGGTGGGAGGTGGTGACACACAACGACCAATCCTGAAAGACCAC
TCTTTCGTCTAAGGATGCCTAACCGCCGCACCGATCATTCGGGGGGGGCGGGACACTGCGAGGTGGGTAGTTTATCTGGGGCGGATGCCTCCTAAAGAGT
AACGGAGGTGTGCGAAGGTAGGCTCAAGCGTTGATTCTGCTCGTGAGCGTAATGGTATAAGCCTGCCTGACTGTGAGACCGACTGGTCGAACAGAGACGA
AAGTCGGCCATAGTGATCCGGGAGTCCCGTGTGGAAGGGCTCTCGCTCAACGGATCAAAGGTACGCCGGGGATAACAGGCTGATGACTCCCAAGAGCTCT
TATCGACGGAGTCGTTTGGCACCTCGATGTCGACTCATCACATCCTGGGGTTGAAGAAGGTCCCAAGGGTTCGGTTGTTCGCCGATGAAAGTGGTACGTG
AGTTGGGTTTAGAACGTCGTGAGACAGTTCGGTTCCTATCTACCGTTGGTGTTAAAGGGAGAACTGCGAGGAGCCAACCCTAGTACGAGAGGACTGGGTT
GGGTCAACCTATGGTGTACCGGTTGTTATGCCAATAGCAGCGCCGGGCAGCTAAGTTGGTATGGAAGAACTGCTGCGCCGCGGGAAATCCTTCTCTATA