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Detailed information on CNT30499107


BLAST search results

BLAST vs Swiss-Prot:
sp|Q8VZC0|UXS1_ARATH, E-value = 3e-79

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30522345Digitaria exilisSetaria italica99.4951.8795.37389forward
CNT30530404Digitaria exilisEucalyptus grandis67.2674.0886.69263forward
CNT30316147Digitaria exilisCorylus avellana74.9439.3383.96293forward
CNT30499549Digitaria exilisCoffea canephora58.5746.7379.48229forward
CNT30615836Digitaria exilisSesamum indicum25.0625.5986.7398forward
CNT30729539Digitaria exilisCorchorus capsularis86.4550.379.88338forward
CNT30486152Digitaria exilisOlea europaea54.2223.4380.19212forward
CNT30289293Digitaria exilisTriticum aestivum29.1637.587.72114forward
CNT30223417Digitaria exilisHordeum vulgare56.5297.3689.59221forward
CNT30539234Digitaria exilisBrassica napus56.0123.9381.28219forward
CNT30143836Digitaria exilisMedicago truncatula40.4127.181.65158forward
CNT30261302Digitaria exilisBrassica rapa56.0142.3681.74219forward
CNT30447453Digitaria exilisSaccharum spontaneum10068.2493.61391forward
CNT30231964Digitaria exilisAnanas comosus46.5514.9280.77182forward
CNT30718631Digitaria exilisMalus domestica golden60.3641.1184.32236forward
CNT30343308Digitaria exilisEragrostis tef70.0810091.24274forward
CNT30360575Digitaria exilisLactuca sativa54.9935.6682.33215forward
CNT30570592Digitaria exilisVitis vinifera48.8559.1384.29191forward
CNT30645151Digitaria exilisCannabis sativa56.5223.1982.81221forward
CNT30105598Digitaria exilisOryza longistaminata63.4335.9989.11248forward
CNT30319856Digitaria exilisAsparagus officinalis57.5480.3683.56225forward
CNT30574680Digitaria exilisOryza barthii63.4327.0789.11248forward
CNT30579496Digitaria exilisEchinochloa crusgalli99.4999.4993.06389forward
CNT30115589Digitaria exilisOryza nivara63.4317.3889.11248forward
CNT30603529Digitaria exilisOryza punctata74.1737.9186.9290forward
CNT30174824Digitaria exilisVigna angularis99.7441.0580.26390forward
CNT30550386Digitaria exilisOryza brachyantha69.3198.5587.08271forward
CNT30337932Digitaria exilisCynara cardunculus58.5727.9380.79229forward
CNT30726386Digitaria exilisLupinus angustifolius44.2519.2480.92173forward

Expression of CNT30499107

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MSSNRGLPRWCTTLSLRPVKKLSTTMTLSPWARSLLTRWLPTNP

>peptide 2 (48 aa)
TYGIYMAPVALLLRMFKRITIHLTGTSQQEPGPNPLSQSKHVQCPHDI*

Sequence

>CNT30499107
ACACCTATGGGATTTACATGGCCCCAGTAGCTCTCCTTCTGCGGATGTTCAAGAGGATCACCATACACCTCACTGGTACTAGTCAGCAAGAACCGGGCCC
CAACCCTCTTAGCCAGTCCAAGCATGTTCAGTGTCCCCATGACATTTGATATGACGGTCTTGATGGGATTGAATTTGTAGTGCACGGGTGATGCCGGGCA
GGCGAGGTGGTAGATCTGGTCGACCTCGAGGAGGATTGGCTCGACGACGTCGTGGCGGATGAGCTCGAATCGCGGGTTGCCGAGGTGGTGCACGACGTTG
TCCTTGCGTCCCGTGAAGAAGTTGTCGACGACAATGACGCTGTCCCCTTGGGCGAGGAGCTTGTTGACGAGGTGGCTGCCGACGAACCCCG