Detailed information on CNT30499058


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9MUY0|MATK_MOLCA, E-value = 2e-47

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30616211Digitaria exilisSesamum indicum33.8828.9784.72144forward
CNT30185941Digitaria exilisSecale cereale74.5934.9591.17317forward
CNT30385268Digitaria exilisTriticum turgidum74.5932.8890.85317forward
CNT3018289Digitaria exilisZea mays100.4716.4592.97427forward
CNT30685586Digitaria exilisTriticum urartu35.7627.7990.79152forward

Expression of CNT30499058

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MKVEVYILVNTKSIFRRSTMIMKKIYTYLTKTIKNIPI

Sequence

>CNT30499058
CCTACTATGGAACATTTCAGAATGGAAAATATGCAAGTTTTATCTTTATATCGACCTTTTCAAGTTTATTAGTTTTGTCTAATGATTAATTAAGTGTCAG
AGAATTCACCAGGTCATTGATACAGATAATATCCAAATACCAAATACGATCACTGTTTGATCCATTGAAAGAAAAGTGTGTTGTTTTAGTGAACATCAAA
GAAAAAACTTGCTCTTCTTCCGTAAAAAATTCTTCCAAAAATACCGAACCCAATCGTTGTATACAAGTTTGTACCGTACTTTTATGTTTACGAGCTAAAG
TTCTAGCACATGAAAGTCGAAGTATATATTTTAGTCAATACAAAGTCCATTTTTCGAAGATCCACTATGATAATGAAAAAGATTTATACATATCTGACCA
AAACGATCAAGAATATTCCAATCCG