Detailed information on CNT30498788


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691790Digitaria exilisOryza sativa20.946.3791.8449forward
CNT30361762Digitaria exilisSorghum bicolor29.4921.0494.269reverse complement

Expression of CNT30498788

Peptides detected in this lncRNA

>peptide 1 (42 aa)
TNPFHLRSPRPFDLRLVRCVSPLWKEQHLLPLTPLFSSRRKA*

Sequence

>CNT30498788
CACCAATCCATTCCACCTCCGTTCACCCCGTCCATTTGATTTGCGTTTAGTGCGTTGCGTTTCTCCCCTTTGGAAGGAGCAGCACCTCCTTCCTTTGACA
CCCCTGTTCTCCTCTCGGAGAAAGGCTTGAGGACCCAAGAAGAGGATAGCAATGGGGGAAGCTGCCGGCGACCGTGTCCTGAGCCGCCTCCACAGCGTCA
GGGAGCGCATCGGCGACTCCCTCTCTGCTCACCC