Detailed information on CNT30498473


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30524453Digitaria exilisSetaria italica37.1421.492.95156forward
CNT302540Digitaria exilisZea mays30.7118.3590.7129forward
CNT30353506Digitaria exilisEragrostis tef55.7124.6884.62234forward
CNT30151052Digitaria exilisBrachypodium distachyon14.7626.7291.9462forward
CNT30581942Digitaria exilisEchinochloa crusgalli55.9550.5488.09235forward

Expression of CNT30498473

Peptides detected in this lncRNA

>peptide 1 (60 aa)
MTVSRLLPKGSLRCLVRVAGQAQWVEWATGVELVLQLKTVDDPVVLCAADEDDLGDDGHH*

Sequence

>CNT30498473
CGATCAATTACTTAAGTATCTCAGGCACAATTTAAATCAGTAGTCTTTTCGGAGATCAGAACGAAATTGTTTCTTCCCCCCTCTTGATAATTTACACTCA
TGGCACATTCTTCTTCAGACCCTCACACACACTAGCTCTCCCCTGCCGGTAAAATCAAACGCAGCAGCCACATTGCCACCGGCGTTCTTACAGGCTGGGC
GTCCTCTCGGCGGCGCCGGAGATGACGGTGAGCAGGTTGTTGCCGAAGGGGTCACTGAGGTGCTTGGTCAGGGTCGCTGGCCAGGCCCAATGGGTCGAAT
GGGCCACCGGGGTGGAGCTTGTCCTCCAGCTCAAGACCGTTGATGATCCGGTAGTACTCTGCGCCGCCGACGAGGACGATCTCGGCGATGACGGCCACCA
CTAGGTTGATGGGGATGCTG