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Detailed information on CNT3049788

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT3020283	Cucumis sativus	Citrullus lanatus	28.28	27.54	93.85	179	forward
CNT3036631	Cucumis sativus	Cucumis melo	89.26	95.6	93.1	565	forward

Expression of CNT3049788

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MKARSGKKALILNYLLNNCNYFMIKSLKEGELYDGGIDW*

>peptide 2 (56 aa)
MVELIGDEATSILSPLLIKYKTTFESNSTVYVRHWNFGTFVSKEHQDKKWLEDQQW*

>peptide 3 (70 aa)
MKQLQFSHLYSSNIRQLLNPIQRFMYDIGTLEHLFQKNIKTRNGWRINNGEDGPDQTLSYNEGKEFIQFK*

Sequence

>CNT3049788
ATTGAATTAGGCAAACCTGACCCACGGACCCCATTTTTCCAACGTGCAAAGGTGCTTTGAGCGGCGAGAGAGCAAAGCATTTCCATGAAAGCGCGCAGTG
GGAAAAAAGCTTTGATTCTCAATTACTTGTTAAATAATTGTAACTACTTTATGATCAAATCACTAAAGGAGGGCGAGCTTTACGATGGTGGAATTGATTG
GTGATGAAGCAACTTCAATTCTCTCACCTTTACTCATCAAATATAAGACAACTTTTGAATCCAATTCAACGGTTTATGTACGACATTGGAACTTTGGAAC
ATTTGTTTCAAAAGAACATCAAGACAAGAAATGGTTGGAGGATCAACAATGGTGAAGATGGACCAGACCAAACTTTAAGCTACAATGAAGGAAAGGAATT
CATCCAATTCAAGTGAAGGTTCATAGAGTTTACTAACCGATCGTTGTAGTTTTGGAACGGTTCGAGGTCTGCGATGCAGCAGCCATTCGCTCTTTCCTTA
ATCTGAGATCATCTAACAGCTTCTGAGCAAAATCTGATCTTTTTGCCATGTTGGGTTTTGCTGGGTGGGAACTCAAGGTAACTTCTCATCAACCAAGAGA
GGGAGTGTGTTTACATTGTAGACTATTTCTAAG