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Detailed information on CNT30497701


BLAST search results

BLAST vs Swiss-Prot:
sp|O23755|EF2_BETVU, E-value = 2e-69

BLAST vs NONCODE:
NONGMAT000778, E-value = 2e-51

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30674834Digitaria exilisSetaria viridis60.9230.8996.97198forward
CNT30316236Digitaria exilisCorylus avellana62.4644.2387.68203forward
CNT30547574Digitaria exilisIpomoea triloba63.3858.0385.92206forward
CNT30371838Digitaria exilisArabidopsis thaliana68.6216.9184.3223forward
CNT30276060Digitaria exilisChenopodium quinoa62.4632.0287.19203forward
CNT30379936Digitaria exilisManihot esculenta7673.9586.64247forward
CNT30405823Digitaria exilisBeta vulgaris38.4627.7888125forward
CNT30488117Digitaria exilisOlea europaea62.4641.684.73203forward
CNT30711584Digitaria exilisGlycine max89.2341.1984.48290forward
CNT30191304Digitaria exilisSecale cereale99.6924.991.98324forward
CNT30300473Digitaria exilisTriticum aestivum99.6933.4790.74324forward
CNT30224354Digitaria exilisHordeum vulgare99.6962.4392.9324forward
CNT30395070Digitaria exilisTriticum turgidum99.6942.3589.81324forward
CNT30561656Digitaria exilisActinidia chinensis98.4622.8684.69320forward
CNT30552635Digitaria exilisOryza glaberrima98.4630.8391.56320forward
CNT30440797Digitaria exilisAegilops tauschii99.6944.5190.43324forward
CNT30313757Digitaria exilisCamelina sativa68.9225.5483.04224forward
CNT3059659Digitaria exilisArabidopsis lyrata56.6242.480.98184forward
CNT30612508Digitaria exilisArabis alpina69.858.9483.7227forward
CNT30135610Digitaria exilisLolium perenne80.9231.0992.4263forward
CNT3014085Digitaria exilisZea mays79.3842.393.41258forward
CNT30605685Digitaria exilisGossypium raimondii88.6237.786.46288forward
CNT30683923Digitaria exilisTriticum urartu99.6935.4189.2324forward
CNT30596122Digitaria exilisOryza meridionalis69.8532.887.67227forward
CNT30369654Digitaria exilisOryza glumipatula98.4636.3691.25320forward
CNT30107537Digitaria exilisOryza longistaminata90.4631.9990.48294forward
CNT30100253Digitaria exilisOryza rufipogon98.4629.0491.56320forward
CNT30575129Digitaria exilisOryza barthii94.7737.8491.56308forward
CNT30116094Digitaria exilisOryza nivara98.4636.3691.56320forward
CNT30604019Digitaria exilisOryza punctata76.3173.3789.11248forward

Expression of CNT30497701

Peptides detected in this lncRNA

>peptide 1 (41 aa)
NPPGSWNDLATTPVNCISMKNNITDLKANTSHVLLSQGTLL*

>peptide 2 (76 aa)
MFSSARAPSFDAHWKPATTESLISLRYCTPLHISTTMFGPVVSGPKHQIFLARSLSHPNSSERIFERTLGSSRGPMR

Sequence

>CNT30497701
AACCCTCCTGGCAGTTGGAATGACCTGGCCACCACCCCTGTGAATTGCATCAGCATGAAGAACAACATCACAGACCTCAAAGCAAATACCTCGCATGTTC
TCCTCAGCCAGGGCACCCTCCTTTGACGCCCACTGGAAGCCAGCAACAACAGAATCCTTGATTTCATTGAGATACTGCACTCCCTTACACATATCAACAA
CCATGTTCGGGCCCGTGGTCTCAGGTCCAAAGCACCAAATCTTCTTGGCAAGATCCTTGTCCCACCCAAACTCCTCAGAGAGGATCTTTGAGCGCACCTT
GGGATCATCACGTGGACCAATGCGG