Detailed information on CNT30497686


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30523010Digitaria exilisSetaria italica81.1895.3888.24289forward
CNT30524694Digitaria exilisPhaseolus vulgaris21.6327.487.0177forward
CNT30264426Digitaria exilisBrassica rapa24.4416.783.9187forward
CNT30363833Digitaria exilisSorghum bicolor57.0222.9999.51203forward
CNT30620290Digitaria exilisCajanus cajan18.2621.7489.2365forward
CNT30360397Digitaria exilisLactuca sativa35.9630.9981.25128forward
CNT3099936Digitaria exilisOryza rufipogon50.2835.6695.53179forward
CNT30574872Digitaria exilisOryza barthii50.2829.7895.53179forward
CNT30557967Digitaria exilisPanicum hallii57.8741.1299.51206forward
CNT30550454Digitaria exilisOryza brachyantha23.037.4795.1282forward

Expression of CNT30497686

Peptides detected in this lncRNA

>peptide 1 (79 aa)
HEVGLVVVRLELLQQRVELRLVELLVDLGVEEALHLVEVGGVEPRREQRLLDLRLAPLLGARGLGRRGRGRGGGALRRG*

>peptide 2 (32 aa)
MAEEAIGGRGGGLASAGQREQAEVGGEGYMLTL

Sequence

>CNT30497686
CGCACGAAGTGGGTCTGGTTGTAGTCCGTCTTGAACTCCTGCAGCAGCGCGTCGAACTCCGCCTGGTTGAGCTGCTTGTTGATCTCGGCGTTGAAGAGGC
GCTCCATCTCGTCGAAGTCGGTGGTGTAGAACCGCGGCGTGAGCAGCGTCTCCTGGATCTCCGTCTTGCCCCGCTTCTTGGGGCCCGAGGACTTGGGCGG
CGCGGCCGGGGCCGCGGTGGTGGCGCATTGAGGCGGGGTTGAGGAGGGAGAGCTCCATGGCGGAGGAGGCCATTGGCGGGCGAGGCGGTGGCTTGGCGAG
CGCGGGGCAGCGAGAGCAAGCTGAGGTGGGGGGCGAGGGGTATATGCTGACGCTGC