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Detailed information on CNT30497368


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30680010Digitaria exilisTriticum urartu47.361.6280.7228forward

Expression of CNT30497368

Peptides detected in this lncRNA

>peptide 1 (58 aa)
CGYGVPELIDVAVELRKGTQPLWQSRWLFQAFCLVLIFLGNKYQMLVRIYISLAMHWA*

>peptide 2 (36 aa)
RAGTGYLNSSMSPSSSVKVLNPFGNPGGYFKHSVWC*

Sequence

>CNT30497368
CGTGCGGGTACGGGGTACCTGAACTCATCGATGTCGCCGTCGAGCTCCGTAAAGGTACTCAACCCCTTTGGCAATCCCGGTGGCTATTTCAAGCATTCTG
TTTGGTGTTAATTTTTCTCGGCAACAAGTATCAGATGCTTGTGAGAATATATATTTCTCTAGCGATGCATTGGGCATAAATTCATATATTAGAGCACGTC
TTGACCCTTCAGAGCAGAAACCTAGAAGCCGGACGACATTGGCATGGTGGATTGTTCCAATTGTTGCAACTTCGTTGATAAATTCTTCTCCTTGTCCCTT
TGAGTTCTCCAACACTTTGACTGCTACAGGTACTCCATTTGATAGGTCACCTTTGTATACGCTTCCAAATCCACCTTGGCCAAGCTTATTATTGAAACGT
CTTGTTATCTTCTTCACTTCAGAGAACGTGTATCTTGTTGGTTTTGATGTGTTATAAGTGTTTAGGAACATTTCAACTTTCA