Detailed information on CNT30496981


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30553919Digitaria exilisOryza glaberrima31.3632.0587.43191reverse complement
CNT3011843Digitaria exilisZea mays27.0921.1391.52165forward
CNT30689517Digitaria exilisTriticum urartu26.2728.9980160reverse complement
CNT30345639Digitaria exilisEragrostis tef27.9123.3892.35170forward
CNT30319727Digitaria exilisAsparagus officinalis22.6616.0180.43138forward
CNT30101726Digitaria exilisOryza rufipogon32.1834.3387.24196reverse complement
CNT30576293Digitaria exilisOryza barthii29.5634.4887.78180reverse complement
CNT30332970Digitaria exilisCynara cardunculus24.1427.6380.27147forward

Expression of CNT30496981

Peptides detected in this lncRNA

>peptide 1 (64 aa)
MAGFGSLAPKTRNLVVAGGLSAFVLGVYYYTMRAVGGTDELQVAIDKFEEMKKKDAGNSSNAGS*

>peptide 2 (33 aa)
MCWTWICLHDRLVHLKPCLYHVISKLIGGTPAR*

>peptide 3 (55 aa)
PKSGPLFTGGTRQARSAPPPKTYWIAAAGDRGDRALGRRRHGGVNLIIAVGSGGN*

>peptide 4 (30 aa)
MPETPPMQDPKWMLRLCTLSFYVLDLDLLT*

Sequence

>CNT30496981
CCCAAATCTGGCCCATTGTTCACTGGTGGCACCAGACAAGCCAGATCGGCTCCTCCACCTAAAACCTACTGGATAGCGGCGGCGGGCGACCGAGGCGATC
GTGCTCTAGGACGGCGGCGACACGGCGGAGTGAACCTGATCATAGCCGTCGGCTCCGGGGGAAACTAGTGAACTACTGATGGCGGGATTTGGAAGCCTTG
CACCCAAGACCAGAAACCTGGTGGTTGCTGGGGGACTGTCTGCTTTCGTCCTGGGGGTCTACTACTACACCATGAGAGCGGTGGGAGGCACAGACGAGCT
GCAGGTCGCGATTGATAAGTTTGAGGAGATGAAGAAGAAGGATGCCGGAAACTCCTCCAATGCAGGATCCTAAATGGATGCTTCGACTCTGCACCCTTTC
TTTCTATGTGCTGGACTTGGATCTGCTTACATGACAGATTAGTTCACCTAAAACCATGCCTGTACCATGTAATAAGTAAATTAATAGGTGGTACTCCTGC
TAGATAGATCGAGCTTCTGCTTTGATGAAAGCTGTATGTATTGTTTTGATTCCAGAAAGTGGTTGCAACTTGCAATGCCTAAAATTTCCTGGACTATGAT
ACTAGTATG