Detailed information on CNT3049669


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3021413Cucumis sativusCitrullus lanatus66.3452.386.83205forward
CNT3036405Cucumis sativusCucumis melo65.744.7191.13203forward

Expression of CNT3049669

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MTAIIQKERYNRHLKRRNTTENESAWRFYNCY*

>peptide 2 (39 aa)
RDLEIFITSRFFIIFNHRLDIDDERNSVISQISTERSKY*

Sequence

>CNT3049669
CGAGATTTGGAGATATTTATCACGTCAAGATTTTTCATCATTTTCAACCATAGATTAGATATTGATGATGAAAGAAACTCTGTAATCTCTCAAATTAGCA
CAGAGAGAAGCAAATACTAAACAGACATGGATGAACACAGGAATCTTCAGCTAAAAAGATCACTGACTGAACCTTTATAACAACAGCATATAAAGTTTTT
CCACAACTCCATGACTGCTATTATTCAAAAGGAACGCTACAATCGACACTTAAAAAGACGCAACACAACGGAGAACGAAAGCGCTTGGAGATTTTATAAT
TGTTATTAA